LOCUS CAA92014.2 821 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Apple domain-containing protein protein. ACCESSION BX284606-2597 PROTEIN_ID CAA92014.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="T21B6.3" /locus_tag="CELE_T21B6.3" /standard_name="T21B6.3" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00011880" /db_xref="EnsemblGenomes-Tr:T21B6.3" /db_xref="InterPro:IPR000884" /db_xref="InterPro:IPR003609" /db_xref="InterPro:IPR036383" /db_xref="UniProtKB/TrEMBL:Q22631" /db_xref="WormBase:WBGene00011880" intron_pos 20:1 (1/7) intron_pos 47:1 (2/7) intron_pos 76:1 (3/7) intron_pos 152:1 (4/7) intron_pos 725:0 (5/7) intron_pos 768:2 (6/7) intron_pos 787:2 (7/7) BEGIN 1 MQATVGLFAL AVLFCLADAG RISVSRGKNV TKIDDLCARM HNNTALEGSS PLLMMQATAY 61 ECQKKCVDIF PECSAVVYYY LHNETKKHFC YLFSDNSVQD KIDLVEQKPE NKKDIVRMLE 121 LVVDCHQFDA HPPLEEDGLA SSTDKVDRKK RQQGDEAVEG VGDWTDWSHC SSNGHEVRSQ 181 ACEYGRKIQR RGCPARSAPQ RVPAPPAQQY APRAPEYPSA QQQQQQREQQ QREQQHREHQ 241 ARLQQHQQQQ QQQQQQQQQR PPQPQPQPQP QPPQRPPQQP QSFSGTHELH LQRQREQQQQ 301 QQQQQQQQQQ RQQNPQQQPQ QTTQFGQSQI QLQSGPVPPQ QHPQQQQPQQ QPELERSPLD 361 QHAQLYQQRM SQYRENFNQR HPARPKADPC PGGFCAPVPQ APQQERPTPP PVLAPVINTA 421 TQPPLPQPYP TRYRPAPPPP PACDGQGCVN PPVVSGVWHD WSDWSTCSCT CGDGAKSRRR 481 ECSTNNCQGA DYETEPCNLG PCQTWSEWCE WSTCSASCGS GQRERTRFCH LGTNRCEGKD 541 YESEQCSAGP CPEWSQWEDW GQCSVTCGQG VAVRQRTCLG GVFGDHLCQG PKTEQRACDG 601 GPCSLWSPWQ EWSTCSASCG SGMKRRQRVC QFGTDCQGPN EESQFCYGPP CAEWTEWCEW 661 SGCSSKCGPG QRTRTRGCLG PNGQEATTCQ GPSIETTLCE GQSCCNWSEW CHWSMCDKEC 721 GGGQSIRTRT CLNSAGSPDS SCHCDGPDRE EKECNSQSCA PQCAWNTWCE WSPCSTQLAC 781 EVGVQSRSRQ CVGESGCHCI GLAEESQQCR GLTQCPPKPP C //