LOCUS CAA91979.2 887 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Probable dual specificity protein kinase madd-3 protein. ACCESSION BX284606-3425 PROTEIN_ID CAA91979.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="madd-3" /locus_tag="CELE_E02H4.3" /standard_name="E02H4.3a" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00006517" /db_xref="EnsemblGenomes-Tr:E02H4.3a" /db_xref="GOA:G5EDB2" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/Swiss-Prot:G5EDB2" /db_xref="WormBase:WBGene00006517" intron_pos 513:0 (1/9) intron_pos 551:1 (2/9) intron_pos 611:2 (3/9) intron_pos 642:0 (4/9) intron_pos 699:0 (5/9) intron_pos 740:1 (6/9) intron_pos 794:2 (7/9) intron_pos 824:0 (8/9) intron_pos 871:2 (9/9) BEGIN 1 MPILHQKIAS TGGQPSTNSL ALRRLPLVVI PRKRKYKNYV SRRRNTQLLA SLRRCVSDPN 61 VYKSYNHWKA LLRPMTPIKS GAPTPKTVTP MPVPQIPPHQ KMTPNPTPTQ NPVQLPLPHA 121 VSEKPGDKKS TGPTPSPVPS KAPISAAKLP GTVTKVAPLL SAAQPPPKTL APAPGASETN 181 SGSGPVSKQV SGKLTELKSK NGTVTEKTEK AVLRIPSSAS TRAKAASAVA PEANPAPVPT 241 ATKPSPFAPA IAPLRDGAPA QPPAPIQASA PLRPPVAKQN SLQKPPEPKR SVGAPPKALP 301 SELVNKIDGI EFLPQSSNQN TDDGQQPTTS TGGAKALRRA YGSKSGTTIC AIGSPNVPST 361 SQPQQGDNEK RLIEKKLSLR KKKLSGEGVP PAGSMLTGSK SGVEIGLSSN LTTTNNNNNK 421 EQTDEQRAKK TVNAVAAAFS TQAGSGNATT VDDPASTTTS KENPAAQPPK PKSAAVQNLI 481 SQLQLPASVS AKVDKIIACG DKARKPSRSG LQASQARPKV PEIVSSQRTQ HQDDKDGHLI 541 YSKGDFILNR FTIYDTLGEG TFGKVVRVND SLSDTFMALK IIKNVSKYRE AAKLEVKVLQ 601 KLAEKDPEKK NWVIHMGSYF DYNGHICLLF DLMGSSIFDF LKANHYKPYP MEQTLHITWQ 661 LCNAVKFLHD NKLTHTDLKP ENILFVDSRY TTKLVDKKPL RVLHSTHVRL IDFGSATFDH 721 EHHSIIVSTR HYRAPEVILE LGWSQPCDVW SIGCILYELY TGVTLFQTHE NREHLAMMER 781 VLGDIPLRMA KRTKTKFFIN GRLDWVNTSA DAAYVRDNCK PLRRSMSCTD PEHVELFELI 841 ENMLMFEPLA RMKLPEALQH RYFNRLPENL KIPCKMDAST NPRINGD //