LOCUS CAA91792.2 505 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Prion-like-(Q/N-rich)-domain-bearing protein protein. ACCESSION BX284606-3088 PROTEIN_ID CAA91792.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="pqn-18" /locus_tag="CELE_C34E7.1" /standard_name="C34E7.1a" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00004108" /db_xref="EnsemblGenomes-Tr:C34E7.1a.1" /db_xref="EnsemblGenomes-Tr:C34E7.1a.2" /db_xref="UniProtKB/TrEMBL:Q18456" /db_xref="WormBase:WBGene00004108" intron_pos 172:2 (1/7) intron_pos 211:0 (2/7) intron_pos 275:0 (3/7) intron_pos 317:2 (4/7) intron_pos 349:1 (5/7) intron_pos 458:0 (6/7) intron_pos 488:0 (7/7) BEGIN 1 MYSATPPSQP QPKQSRQQQY PSQQPPAYNY PHQGYGQMGQ MGHGSLPMDT RGIQQQPQNM 61 GTMMGRQVPL QQQAAAGQMN AHGMPMDNRS MNSGQMQHLD NRMGSQQMTT NQRPMGMESH 121 NMGQLGNNQM GSMGSMNSSM SNSMASMGGM MSDRTMGTQQ HQMMGQHQQQ QSTSNPGNNQ 181 QMQRMMNPPA YSQQEKQRME QYQRQQHQSQ MQSYQSQMQQ SMTPVVQAPA PAKPAPKNNS 241 RRKRTVNKAN LDEPTQVPAP NYHFQPPPSY GYQQNNNMMG NPQVSGHQMA GGQQQLQHHA 301 MMHGGPGGSQ SQYPNTKSSE MVRLELRNSI QAKQQQQKQK EQPPMDQQHR VPAQQAQMQR 361 AMQQDSSMMM GNQMGQYQYS QMGQPPHYHQ SSSMGNGMGQ APQMGQGHPQ QMQEMGSFNT 421 PQPQVQINQN TPISSVASTS SASSLDFPNE LGFFDMQDPE LPVSCDKLEE NLKSLTVHDF 481 AILGRCAFDF SNQQTIDFVR QILLM //