LOCUS CAA91488.3 1081 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans Receptor-type guanylate cyclase
gcy-9 protein.
ACCESSION BX284606-2704
PROTEIN_ID CAA91488.3
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="gcy-9"
/locus_tag="CELE_ZK455.2"
/standard_name="ZK455.2"
/note="Confirmed by transcript evidence"
/db_xref="EnsemblGenomes-Gn:WBGene00001536"
/db_xref="EnsemblGenomes-Tr:ZK455.2"
/db_xref="GOA:E7EAU8"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR001054"
/db_xref="InterPro:IPR001245"
/db_xref="InterPro:IPR001828"
/db_xref="InterPro:IPR011009"
/db_xref="InterPro:IPR018297"
/db_xref="InterPro:IPR028082"
/db_xref="InterPro:IPR029787"
/db_xref="UniProtKB/Swiss-Prot:E7EAU8"
/db_xref="WormBase:WBGene00001536"
intron_pos 38:1 (1/23)
intron_pos 81:2 (2/23)
intron_pos 117:1 (3/23)
intron_pos 178:0 (4/23)
intron_pos 236:1 (5/23)
intron_pos 275:0 (6/23)
intron_pos 329:0 (7/23)
intron_pos 378:1 (8/23)
intron_pos 407:0 (9/23)
intron_pos 432:0 (10/23)
intron_pos 491:2 (11/23)
intron_pos 516:0 (12/23)
intron_pos 559:0 (13/23)
intron_pos 639:0 (14/23)
intron_pos 712:1 (15/23)
intron_pos 765:1 (16/23)
intron_pos 797:0 (17/23)
intron_pos 829:2 (18/23)
intron_pos 877:2 (19/23)
intron_pos 919:0 (20/23)
intron_pos 977:0 (21/23)
intron_pos 1038:0 (22/23)
intron_pos 1065:0 (23/23)
BEGIN
1 MRLYLFFISS LLLAESRRSI SKISHDEINQ HVKTTLSSEG IVRIGHLHPT NPIIAHEPDV
61 LKMCADDLKM RNILPQNYTL TVFTMESCNK YSGVEHAAFL HYLKNASVYF GPGCNNEMLV
121 IGRLAPRWNV PIIAHMSGDD ALSDRVQFPT LGSVALTSAS EMAKATVTYL NLNNWDQIGI
181 VRPSVGYERL SVYSLQHQIK KRDINLNVIL DIEPFSSPEE IISTGKLTTL KSMARIIVVE
241 LGMDIHSVTN FMLAIHRSEI KNEEFVFVIP WLAHQNDHYP WEAANVDKQE VKLAFENTII
301 ITAHGYDKKF FDDFQMKFSA VTGVLANHYA TLSYMSLYDA LFLYGLALRD AFEDGGGYNV
361 HMNGSLIWSR MTNRQFIGMT GQVLMNNKAI RVPSYATYHA INGTLKIVVE LEAKNNDRGQ
421 CEKNEEMCSE HVAHETIQYY WPSDSGKLPP AVPKCGFTGA ECDYRPYFIG ASLLAFILTV
481 GPLSYFIYLK QKERLLYDMT WRIPRESIKM LEGKSKSEHS LASKSQSSGS FSGSMNSKQN
541 GLIAAKQAVS NGVKLAIKRY QQVRNITFPK SELRLLKELK ICENDNLNKF YGISFNQQNE
601 FIVMWVLCSR GSLEDILFND ELKLGRNFQV SFAKDVVKGL NFLHTSPLLH HGMLCLQNCL
661 VDSNWTVKLT NFATEAVIFE KLDHNELRPF INTDSESADD VSDPTKDFAR KKYLQQAPEI
721 IREIVTTKTI PEGSQSADIY ALGMVLYQIL FRVEPFHERN KSINKLMETL AMANDDDQLI
781 RPTFPSSNTG EGYNLQLLSC IEACWLEIPE MRPPIKKVRT MVNANLKSTG KGSLVDQMMK
841 MMEEYTANLE NMVRDRTALL EEAQKQADRL LNSMLPKSIA EDLKIGKPVL PQLYSCATVL
901 FSDIRGFTRI SSTSTPLQVV TFLNDMFSGF DAIIAKHDAY KVETIGDAYM IVSGVPTENG
961 NSHAQNIADV ALKMRAFICN FKLAHRPEEL MMVRIGFHSG PVAAGVVGLA APRYCLFGDT
1021 VNTASRMEST GVANKIQISE GAYNLLHCFF PQFQMVERGK IEVKGKGECL TYYLEGRTGK
1081 Q
//