LOCUS CAA91484.2 539 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Protein lin-14 protein. ACCESSION BX284606-2752 PROTEIN_ID CAA91484.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="lin-14" /locus_tag="CELE_T25C12.1" /standard_name="T25C12.1a" /note="Confirmed by transcript evidence" /db_xref="WormBase:WBGene00003003" intron_pos 21:2 (1/10) intron_pos 65:2 (2/10) intron_pos 138:1 (3/10) intron_pos 206:1 (4/10) intron_pos 233:0 (5/10) intron_pos 292:0 (6/10) intron_pos 328:1 (7/10) intron_pos 400:1 (8/10) intron_pos 455:2 (9/10) intron_pos 505:0 (10/10) BEGIN 1 MGKGQPKEPK IEQSVVDLCK RTVAMNLLQC YPTTTVDEMN CEEWGNGTES TQSVAACQGC 61 IELRKEVTDL RQAVNLILPM LPLYPTIGNG FNATGLAAQP TLQHVIQQSL LRKRPVAQTP 121 TVPQPECPGQ IRPVLSSPAA ALQNVIMLNP WIMGSSLKPA SPTLPNGQIP TTIGETSLQG 181 TDDQTVKWIG PSSVDSNGQK TDSSAASAGD NQNIDVIGDG SESPTSSNHS AQEIALMTSQ 241 QTFLNALKDS SFLFTNPVPT VETAPPLRVA PPINGTTNGT AKAGGPERKP RKPVNDDIVK 301 IVRNQDLSEE NISMFEIPVP KAIASDPTFR PVSEQQIIQQ IIQGKKYEEM EVGECMIQLC 361 KKLAEKRVFG PRLMSQTTVA GLNHSNYANL PIKGICYIQH VCRKVLYDKF ENEEDFWDKF 421 REAMRKLAAR CRRVRHAKKT KHNREEAQAE MLSKRYGEDM PFNLNGAGLI RPKVETVSPE 481 ANILNSDQIK SQLESLFAHI PKTESETPLI EIIQQNISLF THLIRTKVES QSPPLQGPQ //