LOCUS CAA91022.4 817 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans ZZ-type domain-containing protein protein. ACCESSION BX284606-3203 PROTEIN_ID CAA91022.4 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="F02C12.1" /locus_tag="CELE_F02C12.1" /standard_name="F02C12.1" /note="Partially confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00008515" /db_xref="EnsemblGenomes-Tr:F02C12.1" /db_xref="GOA:Q19107" /db_xref="InterPro:IPR000433" /db_xref="InterPro:IPR031962" /db_xref="UniProtKB/TrEMBL:Q19107" /db_xref="WormBase:WBGene00008515" intron_pos 34:1 (1/15) intron_pos 90:1 (2/15) intron_pos 113:2 (3/15) intron_pos 183:0 (4/15) intron_pos 254:0 (5/15) intron_pos 302:0 (6/15) intron_pos 351:0 (7/15) intron_pos 376:0 (8/15) intron_pos 467:0 (9/15) intron_pos 512:0 (10/15) intron_pos 550:0 (11/15) intron_pos 588:1 (12/15) intron_pos 616:1 (13/15) intron_pos 697:2 (14/15) intron_pos 768:0 (15/15) BEGIN 1 MAEPKPEGTN PIRWPEYSDC QFEDCADCGL VILGSMFTCN LCENHHICAS CYNDTVVEES 61 IHSKKSQDLP PEHPHMHHSY RLDMSPFGKL AFPVHDNPCA SCGSKVFPGL RYVCPEICPD 121 YGICATCFIK KKGTEEIELF EAVQANPKLE KKHQIGAAIV TQKYYGIGLA RLDWFQIDKG 181 DEEQMKNLGR KIGFAVYQYP TNLPQEERNS LMPDQLQELM KTMELEAKEA NNNSKSKKKI 241 DLKFVPEFGY TEEQEDHIIK LRDELFDINR RQKKQKEGES NIVETKFVFV SFFADGSHSN 301 ILPLICLRIS DTKIMYVEST GRAYDDWEDF LNKNKLPECN ILYPDGGLYE LEPGGILNLR 361 YDISRRSKLP SKIAKISDRS AMGIGVAATI GSVIGLFTPL APVAATTLLY TAIGTGVYSM 421 ARSGYHIVDR VIHNENVNPL RSRENFVDWL AVAASLASFG AIGGSAYLTV MTTQGLEVSQ 481 AIEYTVNAAI FANFAVSGIA LTASGYNIFE KVANGERPTP LELFQFSTSL LFFTNAAVNL 541 QTAEKLIQQT TQEKINDYRD TLKTAEDKQQ FDQKINENMK NTEGQQGNSK MKANLETIKD 601 IHKAMLADKH VEAHIHEHDV PKKSKPMPSS SVPKMQAKQL TVSDKKIVEE HLQALDARGQ 661 SKLPASKQKI TTYLNVGWDD IAAKVKAILS GGAGGALTER LIDGKTKKVI TMDNGDEGFM 721 GAKVESIPNG VAIRKGVIDR IEITLNDAGE PIPHFVEGSI RTGTEQGVVR IRLENRGILG 781 NIRAKPKVRM YKDNSSTGVE IDDHELSENY FMCYDWS //