LOCUS CAA90672.2 800 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Glutamate 5-kinase protein. ACCESSION BX284606-3070 PROTEIN_ID CAA90672.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="alh-13" /locus_tag="CELE_T22H6.2" /standard_name="T22H6.2a" /note="Confirmed by transcript evidence" /db_xref="WormBase:WBGene00011938" intron_pos 25:0 (1/8) intron_pos 60:2 (2/8) intron_pos 111:0 (3/8) intron_pos 151:2 (4/8) intron_pos 236:0 (5/8) intron_pos 361:1 (6/8) intron_pos 544:0 (7/8) intron_pos 698:1 (8/8) BEGIN 1 MFRATRCLRL PLRNSHINIL RPTQTELIKT RSSALAPYEK VSPITAVGAT PVGVGNGNYC 61 TKTRQKHPLI NTRNDLKKAQ RVVVKLGSAV ITREDECGLA LGRLASIVEQ VSELQQSGRQ 121 MLIVSSGAVA FGRQKLRQEL VMSMSMRQTL RGPSGMTADK RACAASGMPG LMSLYEQLFQ 181 QYGITVAQVL LTKPDIDDDQ RRKNLQATIE SLLSLNIIPI VNANDAVAPD PKLNMHISDN 241 DSLAARLSAE IEAELLIILS NVNGVYTGPP DLEGSRLLYT YVPSENSGVT FGANSKFGTG 301 GMESKVTACV NALNNGVTTV ITNGLAQDAI TDAVAGKKIG TMFCNTKGYE GPPIEEVAEK 361 CRDAGRQLAA LSNKERGAMV RHLAALLVDK EKYIIEANQT DLANAKSAGL DPQLLNRLKM 421 TPEKIQDLHA GLNTIADSAE TLVGRVLKKV KISEGLFLEQ VTVPIGSLMV IFESRPDCLP 481 QVASLAMASG NALLLKGGKE AEESNKALHA LVQEALGTHG FEMRDAVTLV RSREDVADLL 541 QLKDLIDLII PRGSSDLVRS MQEKSKGIPV LGHAEGVCHV YIDKDCDEQK AIQIVRDSKC 601 DYPSACNAAE TILIHKDLAT APFFDSLCSM FKAEGVKLHA GPKLAALLKF APPPAESMSF 661 EYGSLECTLE VVDNVEEAVA HIIRYGSGHT ESIITENTNT AEHFLKHVDS ACAFHNASTR 721 FADGYRFGLG AEVGISTGRI HARGPVGVEG LLTTKWLLRG EGHLVEDFKN GKYSYLHENL 781 NPSEVYRALD AAGELKKATA //