LOCUS CAA90539.2 1184 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans KRAP_IP3R_bind domain-containing protein protein. ACCESSION BX284606-3804 PROTEIN_ID CAA90539.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="C09G1.2" /locus_tag="CELE_C09G1.2" /standard_name="C09G1.2" /note="Partially confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00007484" /db_xref="EnsemblGenomes-Tr:C09G1.2" /db_xref="UniProtKB/TrEMBL:Q17863" /db_xref="WormBase:WBGene00007484" intron_pos 14:1 (1/4) intron_pos 49:2 (2/4) intron_pos 1095:2 (3/4) intron_pos 1117:1 (4/4) BEGIN 1 MRLKNMMPGF LRYSTTEIKN RMKHGVSDLF GHYSLLEKMS LESEKVITET KQELLGRYHS 61 LLHDFNYGRR PGLKKSNEYQ NLVGRMLMCK IPDIEEMKES KELDSISKST NMEPISCNSK 121 IKLSQKQTSP QTDNDPDYFT AKPTDKITKR PSISRGTAMQ NEGSLFHDKR QNTLGTEHET 181 LKNTVKNTHP KVDKDHKRIE NQDISSKGQE PTCFQKKARL RTEIDTNYLP AKISIHSREN 241 WTRDREHLRR LLESEEPNPK KQKSVPTEHD LKKRGWHSSS THQSMQRIQK QVSSEEVDSK 301 NQKSAQSETD LNYFTLNNNS SKTLFEQQRN VRTDQDLNNN RDSCSACGNN SDAEKEDIKG 361 TRKRSSLENQ HSERMQFSQT EKSSPIGDMV QNSPDFKNMA NRTPAESEKG KKKAQDWQHS 421 LNFRSGRSAI NKQQNEIKIK PSSSNDQKRH WLFKMRESAQ TKKNLKYLIA KRTHQSMQCQ 481 SEFKCVSSSN QTEKDLKSFS IKKNVQVQPC SPSLKSSDIG NERNRIKRQH FSLGEQSFEK 541 RKPALTATGN EKGDLKRKLS LLKDQFSAKQ TEQSLQCSAD LEDGEIDEKH CQILSNSQVN 601 RVFKKRKTAL AAKEPNNFTV SCCSDSNSTG ITDDPIQTKN TKLSLEEQDP LLSERRKTLA 661 TIFNQKKPVQ IDQNLQCSFD LEDGEIDEKQ CQISLHSQVH RVLKKRQLAP AAKDLNNFTV 721 NCSLDSNSNE SNDEPIKTEK TQLLLKEHQP VISKRQETLK TESSFNNFNS TDAHRNCRRQ 781 SKLIEKQPIS LEDSVFEQNK SAQPESVINY FTIDNKNQDW QYFSGPEKDP KLVSFLEAVN 841 KKDALVKHYS EKQRPVRNKN DSDYPTATDT DQRSSSCSEL KGTTMNKKQE ENTRKRLSLK 901 NEEASPEKTL VRAEKDFNHF TVKKKEECLS LSFGFIALPI KKRRPFFEGQ NNSIELKGTA 961 TQIERQSVSS EVHISNYQST PMKNNGRGGQ NSLGFNDHPI KINSSEEQLS GTQKSHPMEN 1021 GFVTTTVTSP ERSGQSSLGS NNVHMNENLN EVRRAPPEQP QEPDEPEESE EQEPVRPEQQ 1081 NIEIPEGGGV LTEPRPVASE WSKLGVNIDG NWMLRKDLTH YRFNWPIDPE KRKIERGKAV 1141 ARCREIRKNG PVSIPHKNNA STITWISKVR GIRRIPLESH TASQ //