LOCUS       CAA90342.2               668 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Cyclin-dependent kinase 11.2 protein.
ACCESSION   BX284606-2459
PROTEIN_ID  CAA90342.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="cdk-11.2"
                     /locus_tag="CELE_ZC504.3"
                     /standard_name="ZC504.3"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00013917"
                     /db_xref="EnsemblGenomes-Tr:ZC504.3"
                     /db_xref="GOA:Q23357"
                     /db_xref="InterPro:IPR000719"
                     /db_xref="InterPro:IPR008271"
                     /db_xref="InterPro:IPR011009"
                     /db_xref="UniProtKB/Swiss-Prot:Q23357"
                     /db_xref="WormBase:WBGene00013917"
     intron_pos      34:0 (1/7)
     intron_pos      70:1 (2/7)
     intron_pos      150:1 (3/7)
     intron_pos      227:1 (4/7)
     intron_pos      268:0 (5/7)
     intron_pos      579:2 (6/7)
     intron_pos      601:2 (7/7)
BEGIN
        1 MSNYSTNGSR KIRISNSDDD SRETRFSIQP RNSHKTKEER YRDKEKERDH ERHHDRERRD
       61 DRYRKVDSRD HRDRNRRSPA GSRTYCRDEP DRRRNNHSDR NRRDRSSERD RDNRSSKSKT
      121 KSPDSLRSKS SRKSQTPNHL PDDGKLFDRI LDPNYKKKEK TVMEVEDVEM SPVEMLDEEE
      181 VSTFTFDDAC GPVRPSNEPE EKDYKSEGDP ESRPATPKTP LTPDYLENTI VSLNETLSDD
      241 EDKGPDDKYG KTPDKEQWES MTENEQKLHR DAMKKRREQR HREAVSKLPV YYPGLRGCQH
      301 ISEYVILNVI AEGTYGEVFR GKNTRTDEVV ALKRFKMEKE KEGFPITALR EINMLLKAGA
      361 HENIVNVKEI LVGSTKTEVY MAMEYVEHDV KSLIDKMRSR NQRFKTGQQK TLMSQLLSGI
      421 EHMHKLWILH RDLKTSNLLI SHSGILKIAD FGLAREYGEA RDIEKRMKLT PIVVTLWYRS
      481 PELLLEPKTY STPVDMWSIG CIMAEFIMMK PMFQGDSEPN QVHQIFQMMG TPTEQIWPDI
      541 KELKVWNMVE FPPVKPGQLR RIFKGEKLVN ETGFDLLNGM LCLNPANRLT ASEALQHDWF
      601 SEHPKAVPPE DLPVYPAKSE LNAAPPENRR KNRLEALLAD EEPERAALLR QFNVKAEQLK
      661 PSGFQLRG
//