LOCUS CAA90342.2 668 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Cyclin-dependent kinase 11.2 protein. ACCESSION BX284606-2459 PROTEIN_ID CAA90342.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="cdk-11.2" /locus_tag="CELE_ZC504.3" /standard_name="ZC504.3" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00013917" /db_xref="EnsemblGenomes-Tr:ZC504.3" /db_xref="GOA:Q23357" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="UniProtKB/Swiss-Prot:Q23357" /db_xref="WormBase:WBGene00013917" intron_pos 34:0 (1/7) intron_pos 70:1 (2/7) intron_pos 150:1 (3/7) intron_pos 227:1 (4/7) intron_pos 268:0 (5/7) intron_pos 579:2 (6/7) intron_pos 601:2 (7/7) BEGIN 1 MSNYSTNGSR KIRISNSDDD SRETRFSIQP RNSHKTKEER YRDKEKERDH ERHHDRERRD 61 DRYRKVDSRD HRDRNRRSPA GSRTYCRDEP DRRRNNHSDR NRRDRSSERD RDNRSSKSKT 121 KSPDSLRSKS SRKSQTPNHL PDDGKLFDRI LDPNYKKKEK TVMEVEDVEM SPVEMLDEEE 181 VSTFTFDDAC GPVRPSNEPE EKDYKSEGDP ESRPATPKTP LTPDYLENTI VSLNETLSDD 241 EDKGPDDKYG KTPDKEQWES MTENEQKLHR DAMKKRREQR HREAVSKLPV YYPGLRGCQH 301 ISEYVILNVI AEGTYGEVFR GKNTRTDEVV ALKRFKMEKE KEGFPITALR EINMLLKAGA 361 HENIVNVKEI LVGSTKTEVY MAMEYVEHDV KSLIDKMRSR NQRFKTGQQK TLMSQLLSGI 421 EHMHKLWILH RDLKTSNLLI SHSGILKIAD FGLAREYGEA RDIEKRMKLT PIVVTLWYRS 481 PELLLEPKTY STPVDMWSIG CIMAEFIMMK PMFQGDSEPN QVHQIFQMMG TPTEQIWPDI 541 KELKVWNMVE FPPVKPGQLR RIFKGEKLVN ETGFDLLNGM LCLNPANRLT ASEALQHDWF 601 SEHPKAVPPE DLPVYPAKSE LNAAPPENRR KNRLEALLAD EEPERAALLR QFNVKAEQLK 661 PSGFQLRG //