LOCUS CAA90331.1 583 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans G-protein coupled receptors family 1 profile domain-containing protein protein. ACCESSION BX284606-2477 PROTEIN_ID CAA90331.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="C39B10.1" /locus_tag="CELE_C39B10.1" /standard_name="C39B10.1" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00008021" /db_xref="EnsemblGenomes-Tr:C39B10.1" /db_xref="GOA:Q18517" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:Q18517" /db_xref="WormBase:WBGene00008021" intron_pos 43:2 (1/10) intron_pos 69:0 (2/10) intron_pos 99:1 (3/10) intron_pos 191:0 (4/10) intron_pos 226:1 (5/10) intron_pos 279:0 (6/10) intron_pos 307:2 (7/10) intron_pos 347:0 (8/10) intron_pos 391:0 (9/10) intron_pos 530:0 (10/10) BEGIN 1 MDANTTWPTI DWCFNMEMWL HTMATQNISQ QMRSKYAHYK TFSYRYNGLL TLVLILLGLT 61 GSSLLLKQIY GSRVFSKRLA VHLGMICFWD IIYLLCCLST YCIPSLIYSV TPIYGPFSYI 121 LFFLQPFASF CVSCTIWQVF AITLERYLAV SSPLEQRTRK AKFGVGWICV AITFCAFILN 181 LLPVPFENEL VDCYEINFDS NGLPMFRNHT MMKPYYDDKI RIYRFLVHFF PDLLFRAPTP 241 IIVIGTLTVK TIQACSQRSV GNFQIGMRFN RNMPLRLSLL NFKFILCNTL YMFNTILLEL 301 LEYGNMENGD YDGYINSFYL TDASNMLLVV HSATNWLLFY KFPSCRKKDA VSMTLSTSIK 361 YSSIKHRVAE YISKQISPLA SALGVDIIHR LCEDISEVRN IIHGKLGKES EKQERETLVG 421 LEFGHFIRDV FRWFGDRNRR VSKKIVYKQY SDAAIKAKIN FKAPEWKTIR TIVVEMIVTH 481 LVAHAKETNC KGVMHSKVEM EECATRVFNQ VLSEMKNVAL CANVEEKQKA RAERFIRSNS 541 TTTAMPIFRE PPRKSHSVSM RFQYSTSVDS VQQCEQQILI HKV //