LOCUS CAA88976.1 1211 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans Protein kinase domain-containing
protein protein.
ACCESSION BX284606-2371
PROTEIN_ID CAA88976.1
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="mlck-1"
/locus_tag="CELE_ZC373.4"
/standard_name="ZC373.4"
/note="Confirmed by transcript evidence"
/db_xref="EnsemblGenomes-Gn:WBGene00013869"
/db_xref="EnsemblGenomes-Tr:ZC373.4"
/db_xref="GOA:Q23260"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR008271"
/db_xref="InterPro:IPR011009"
/db_xref="InterPro:IPR017441"
/db_xref="UniProtKB/TrEMBL:Q23260"
/db_xref="WormBase:WBGene00013869"
intron_pos 20:1 (1/21)
intron_pos 53:2 (2/21)
intron_pos 81:0 (3/21)
intron_pos 122:2 (4/21)
intron_pos 170:0 (5/21)
intron_pos 199:0 (6/21)
intron_pos 236:2 (7/21)
intron_pos 286:2 (8/21)
intron_pos 338:0 (9/21)
intron_pos 382:0 (10/21)
intron_pos 403:0 (11/21)
intron_pos 446:0 (12/21)
intron_pos 732:0 (13/21)
intron_pos 788:0 (14/21)
intron_pos 812:0 (15/21)
intron_pos 844:1 (16/21)
intron_pos 907:0 (17/21)
intron_pos 976:0 (18/21)
intron_pos 1024:0 (19/21)
intron_pos 1047:0 (20/21)
intron_pos 1095:0 (21/21)
BEGIN
1 MGTEPSGSGK IKVDEHYPSE LDEPPVFDVK KIENIRANVK FDTLYQVTKL LGDGKFGKVY
61 CVIEKETGKE FAAKFIKIRK EADRAEVERE VSILTQLRHP RIAQIYDAFY TTTNDVVLIM
121 EIVRGGELFD RVAEESYVLS ELAVVMIICQ LCEAIDYIHK QNILHLDVKP ENIMCVSLTG
181 NRIKLIDFGL ARHYDGTQEL KYMAGTPEFA APEVIKFEKL DYHTDMWSIG VITYILLSGY
241 SPFLGDNLGE TYCNVEKGVW EFTEEFDTVT EEAKDFVTKL LVYDQSKRML PHECLQHPWI
301 AKHRQKAACN TILEKPLNAP TLDNKQIMRY NARRKFRRMI IYVKFLIEMN RLRNSLKTRM
361 SANGHKFFDP LLKMAEKKEQ KISNAIGTAG CPASGLGSLV KMAVDSQKKN GDVPVTQDAN
421 MSTEPEKEEK KKKKKIANAD GSTKTEKTSS VKKKKLVETD GDAGLRPPPE LMTKRASTGG
481 ESLLAAVKVL KNLEVVENGN SPKRKSLCSV KEEKEIPAKK QTEGYKTLET TENGDIRRKS
541 APVKQDTLTC QDNSKVTPQL LETAPNGEIR RKSASAKEEK SVKPEEVIRK KSSASVKETK
601 TVELSVVPVK LEKLASIDEK GEKLVKKKKK TTTVTAEIEK PKSVIESKEE KLVEKPKLLN
661 GTLVSDALEK RRSLGSKRAS ETQDVGLRPL PVVDFSPKIV LTDKKEPKES KTKPAEPLKE
721 IVPETKKPAR QGALRKRDKS LDDILNAAPS PTTLSKSTVT SVKHSVVETI HPSGEIIKSE
781 KVLTKKKSLK KDKSIDDRLP VKIIEDKASL PKLKTDVVTF ESKPVKKTSK IVKLIPEDAN
841 LIKDEKKPTK IVMTSEKQAT TTVQTTTSVK RTTKSSEKKV EHTADGKSVE SSQKKNSQKD
901 DVKVSQVTTK KEEDSTQPAP TLTVKKNVVK QTAEKSTSEK EHKTTENKEQ ERIIKKSSTL
961 KDKDVAQVSL QQSIKVNGEK HKESKVIGTK TVINKLELKG EETINANPKK SSLKKATAKV
1021 TGETTKHLEI STDGKLGVLK TKDTTSMKLS PDSSSDTSSS KNVRILLTDE QSVKSSVRSH
1081 PSVSTRDSSE ERKKVRFAGD VGTPTKLNPP PLFGNGLQKM RSESSLHEKI NGLTTKKSHD
1141 DVSLARKTSL FTDIEYQPRE DFSFEALKEK LTRRVSYGYD DDGKRGKQMV LIPPTNSVKD
1201 KLRHFEKKFA K
//