LOCUS CAA88262.2 587 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Peptidase_M13 domain-containing protein protein. ACCESSION BX284606-2360 PROTEIN_ID CAA88262.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="F42G10.1" /locus_tag="CELE_F42G10.1" /standard_name="F42G10.1" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00009645" /db_xref="EnsemblGenomes-Tr:F42G10.1.1" /db_xref="EnsemblGenomes-Tr:F42G10.1.2" /db_xref="GOA:Q09393" /db_xref="InterPro:IPR024079" /db_xref="UniProtKB/TrEMBL:Q09393" /db_xref="WormBase:WBGene00009645" intron_pos 21:0 (1/9) intron_pos 63:0 (2/9) intron_pos 75:2 (3/9) intron_pos 135:0 (4/9) intron_pos 236:2 (5/9) intron_pos 308:0 (6/9) intron_pos 356:0 (7/9) intron_pos 394:0 (8/9) intron_pos 568:2 (9/9) BEGIN 1 MKLYFLPSIA LWAVFGNGDQ DLSSEHPIPC NNFYEYICHK NITRVPSRLR DVRAMEVSDD 61 IDQYQEYVFH ASNKQRLWQS VNPDIVSKWL VQFNTYWKGV NWNEHQKKHE SFLNLDAHEK 121 YKNLENSFEG YDFQILTKFY KSLKLSVEYL TELKIPISTR NHFYHGLFDE IRDIHILNIR 181 TMSKFSEDRK NELIENVRNL KIIFPYLEYN DVKVWRDAKT AYEKEYYRLK IMIYEPNLSP 241 IIVDKIIRVA AVNPAMEIFE KYITSFTSRF VFQHITAAAS GLSFNYQNEI HISVFTMFNP 301 IADPKSVYDQ FLYVLCHELQ HVHYNVDPPV FDEATWASEK QCVVDRIDHF AAAYKTNRAN 361 WTGAPFSYED SANVAGLRLM LLYVAQKTSD SQEIRDTVER SVARFCTKNR ENLHHNPLDV 421 SINVAASEMP TFNSLYNCKP GDRMYVAPEN YCKTLNMDID VEEYKSQKIE NDDLFVLTHF 481 MDVLEDTAVE LDAANITTFE GKLFDITVEE VEEQEESKEG SAESSSSSSS ESDEESSVER 541 ELDEVSDGLD DSENETELRK SEIASTSRSS FIWPATVFTL LIKYIKF //