LOCUS       CAA86421.3               522 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans SH3 domain-containing protein protein.
ACCESSION   BX284606-2261
PROTEIN_ID  CAA86421.3
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="F49E2.2"
                     /locus_tag="CELE_F49E2.2"
                     /standard_name="F49E2.2a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00009886"
                     /db_xref="EnsemblGenomes-Tr:F49E2.2a"
                     /db_xref="InterPro:IPR001452"
                     /db_xref="InterPro:IPR036028"
                     /db_xref="UniProtKB/TrEMBL:Q20621"
                     /db_xref="WormBase:WBGene00009886"
     intron_pos      35:1 (1/10)
     intron_pos      52:1 (2/10)
     intron_pos      103:0 (3/10)
     intron_pos      182:2 (4/10)
     intron_pos      244:0 (5/10)
     intron_pos      293:0 (6/10)
     intron_pos      349:0 (7/10)
     intron_pos      395:0 (8/10)
     intron_pos      426:2 (9/10)
     intron_pos      491:0 (10/10)
BEGIN
        1 MSVDEQAVPP EVSPSMAANI PQMVHDQLAA QFLPAAKNLG QAGMHLLKTY YMFQEALSNY
       61 CDATHKLIKS ADTAGHKSKN EARELSKVFK EFVQGVNAHQ KVITEFDALA HKVHDYSNKE
      121 KDKLKTEFAE YKAKEKKLLK RKNGETEQDI TAFHKKEAAS WAKQQEMRYK FFNDKLQSWI
      181 HGYVEIGKLF QAQEVIVQPA VGSVIAAPVE IETIPEDHKD WHQDLHEHAA VVAAEEIKEN
      241 VEKKVDEAVQ DSRSNSTSSV ATTLEDLPSS RRLTNDVSGV TLVSNYRRQS IEIQQLPPNN
      301 SYSHIAPPVL PPKPVVENPQ YAPIRAQPVP VTRQEESTYA PRHNVVAEQV PQQPVNSAPG
      361 GVRRAGNTIP GAVNVFGFAN QSNPQPNVRY TPVQNSTPYQ VVTSDYIRVG RVVDNPVTEE
      421 QMNAKKFHVD SSYLPMAAPS HQAQQHSRNH STDISVPSFF NPSQYGSILI VNDDFNASSG
      481 EQMTVNRGDK VILLKCGSRG WVFVRDSISN RTGWVPEPYV NP
//