LOCUS       CAA15516.1               808 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Abnormal pharyngeal pumping eat-20 protein.
ACCESSION   BX284606-3712
PROTEIN_ID  CAA15516.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="eat-20"
                     /locus_tag="CELE_H30A04.1"
                     /standard_name="H30A04.1a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00001148"
                     /db_xref="WormBase:WBGene00001148"
     intron_pos      12:1 (1/13)
     intron_pos      57:2 (2/13)
     intron_pos      86:1 (3/13)
     intron_pos      137:1 (4/13)
     intron_pos      187:1 (5/13)
     intron_pos      205:0 (6/13)
     intron_pos      295:0 (7/13)
     intron_pos      342:2 (8/13)
     intron_pos      385:1 (9/13)
     intron_pos      426:1 (10/13)
     intron_pos      459:1 (11/13)
     intron_pos      711:1 (12/13)
     intron_pos      755:1 (13/13)
BEGIN
        1 MTTFCRVLLI FGIYVAVCCA QSVEDDVFHF TNPSQGNAVW ILDESSLPWT GGYQFLRSIS
       61 GMPTTLLSVV DSSTGVTLGQ CVAPQDATGN FSKRWERFSW ELTASGLDCT FEHGAAIRVE
      121 FDRTQNPRTF SIRIQSITGP ACLRDVVVQT EQATGCPPHL SRNSFTANAL NCSCPFLDAA
      181 NEDSEIENED VDMLANTPQF PLFKGIDPSV LGSANPPTLP PSPCANHECH NNGTCLVSQE
      241 GAATCLCRNG FTGDRCELDV CSSVPCQNGG VCRSNNGIAY CECPPAFTGL LCESAHTDES
      301 VAPICRPECS NGQCVFKDGQ AQCECRQGFT GANCNVLDVC LGDAACSMFG PLAKCVLDDN
      361 MDKMSSLTLI NGTYDCLCPH PIHGQFVDCM QLHAPSATSV QPTEQVVINN VTPSFPVLEI
      421 SKLPTGAPVT FTATSTTLMV TQPTVTVSPT HQVPSEPFVG FTVTRAPLRP LDIGSTTLPP
      481 PFNQHIITAG EPTWSSQQPH QPSEVPTQTT FIFPQTPETT TFAPTTGTQQ PVHKFVSPSV
      541 PDENEEEEEE ETTEETEETF PTPSTMQVAT NGQFTTETAF VTSTIPSTTT DMEETDEDED
      601 MTEEVTDSST QPSTTVFVQP TTTFTTEAPT TTMEEEEEMT TDQVEDIESE EIATTTTQTS
      661 LPFWMTTTNK QVVPDSPTPM VIMPHPQPDE KMETSTEGVV DEESDEERTT ESNEEVVTKN
      721 AEATTPSDIT HHHTSSGKQS SAAASWIIAI IALIVLGLLL LATSLFILRY IRQSRKLHGK
      781 YNPAREEHNL SAAYAMPMSH IAKEERLI
//