LOCUS BDA40432.1 1558 aa PRT PLN 05-OCT-2021
DEFINITION Coccomyxa sp. Obi probable PAN2-PAN3 deadenylation complex
catalytic subunit pan2 protein.
ACCESSION AP024988-85
PROTEIN_ID BDA40432.1
SOURCE Coccomyxa sp. Obi
ORGANISM Coccomyxa sp. Obi
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes;
Trebouxiophyceae; Trebouxiophyceae incertae sedis; Elliptochloris
clade; Coccomyxa.
REFERENCE 1 (bases 1 to 3766449)
AUTHORS Harayama,S. and Ide,Y.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2021) to the DDBJ/EMBL/GenBank databases.
Contact:Shigeaki Harayama
Chuo University, Research and Development Initiative; 1-13-27
Kasuga, Bunkyo-ku, Tokyo 112-8551, Japan
REFERENCE 2
AUTHORS Harayama,S.
TITLE The genome sequence of the unicellular green alga, Coccomyxa sp.
strain Obi
JOURNAL Unpublished (2021)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: SMART Analysis v. 2.3.0.
Assembly Name :: COCOBI_1.0
Genome Coverage :: 170x
Sequencing Technology :: PacBio RSII
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /chromosome="1"
/db_xref="taxon:2315456"
/mol_type="genomic DNA"
/organism="Coccomyxa sp. Obi"
protein /locus_tag="COCOBI_01-0850"
/transl_table=1
intron_pos 20:0 (1/29)
intron_pos 35:1 (2/29)
intron_pos 98:0 (3/29)
intron_pos 150:0 (4/29)
intron_pos 228:0 (5/29)
intron_pos 285:0 (6/29)
intron_pos 365:0 (7/29)
intron_pos 397:0 (8/29)
intron_pos 438:2 (9/29)
intron_pos 469:0 (10/29)
intron_pos 505:0 (11/29)
intron_pos 533:0 (12/29)
intron_pos 551:0 (13/29)
intron_pos 602:0 (14/29)
intron_pos 698:1 (15/29)
intron_pos 751:0 (16/29)
intron_pos 796:0 (17/29)
intron_pos 839:0 (18/29)
intron_pos 885:0 (19/29)
intron_pos 971:0 (20/29)
intron_pos 1181:1 (21/29)
intron_pos 1225:0 (22/29)
intron_pos 1288:0 (23/29)
intron_pos 1322:0 (24/29)
intron_pos 1366:2 (25/29)
intron_pos 1389:1 (26/29)
intron_pos 1418:0 (27/29)
intron_pos 1472:0 (28/29)
intron_pos 1521:0 (29/29)
BEGIN
1 MQSGALSRAI LLHPSLKESV TSISFSTSEE LLWSGTATGC LFALQCPDLS IYSTVRAHKV
61 PILGSSPLGD GVTSVSQEWV RWHSSGGVPR AMLTVAQAEV EAFTAICTEP HSRGQAMVGY
121 SCAAAAGADS PAENGVALVD LFTGKVVSKA AVAEPVYVMR PAARGLIALG SPGGAVALAD
181 PRAGFKVQHS VAAHAAGLAD MDARADSLAT CGYGTRQGMV VAENYVKVYD LRSAPRMTAS
241 VPFPAGPSLL RFHPKFSSTI LIASSLGSFT LADTSGAAFS RYERLETEGD TITACDVSAS
301 GEEIAFGSAA GYLYLWVMGS PTEAPRVNAY SQPLEVPSRV PPPPASPLTE DDSFALAAVY
361 PAGQGRLLSD MSAAELALTH RPPRLVHPLV AAGLKQVDFV GHAQNPHLKR GMPRGEAARA
421 AAPLRNLRLE AKPERLELVD GRVERERKRA AAGQSGLPEG YRYITLRQVH SSRFDDFDYA
481 LHNPTRFAGL ENEIANCYAN SLLQVLYFIP ELRAAMLAVR PDPGEEFSLA DEVTLLIRML
541 QNLLVEDSVL VTLLFRMLLA GGPAACQATN LLRALRQNKG AAALGLLETH SQRSGENTDI
601 EVETNKEKSL PRRVQSLQRF LLERLKSELA QRRLPPPLPA LPEADAPNDD QPSSSSHPAG
661 AAEPGVSANS APDQSPGSAA EDSSGDNGMS REGNAAVGEV GEGVEGEQWP PAPAQLAAGL
721 DCLFGILMQQ RIRCLYGEKA EKTQDILSFQ VELQYPPAKE RPTRAAGAAD APQPLSFRPG
781 EAPKAAALPQ WAPDQVRPSF SELLAASLKP AADMRAWFDD RLKYQHVQQQ RLPKRLPTVL
841 VVSCGLLDSA DLLWWQPYHS HPHRRSCAWL PAAIEVTSDY STSQVTVREA DNAADLATPA
901 EDAPEEATPP EQATAPREGT PPDGISGRTR AVYELAALVA HILEDTGVKE KNKGKKERVE
961 DEGHIVAHIK VLPPYVQPGQ GFMPDAREAS SPGASPLPTG FGRRPRSAPA SSRLGSPGAK
1021 LGTSDYPPPS ASPSGMDPGP KAEPGRPLEG SGYSPGSESN TCTADVEPDV FTVQDDPQAT
1081 AADGPSAGLL PTGSAEGVLD QALQTGSAPS AVADMGECAS MAATDGTAPE DAMTASGRAA
1141 DVEDVLELSA EVERLACAGG NAGEGDGGPG PEGPGTAPDD GAQTLELDRG SEPAALAAAR
1201 SGSLPATSQP SAQHEPAPPV NQSQGHAIGE PDLPKGPSPI SLGRGIAPGR RAEWLLFNDF
1261 SITPTNAAEV TQLYGLQKVP CLLYYKQVDS IEAAAQMPPP KQGPVLSFEA FRQLCNAPPL
1321 QFQGASRLKP PTFQALGPDE EVRPGMLLGI DTEFVAHSPP DKVMRGGVEV ETRPSRLGLG
1381 RVSVVRGTGA LSGQACIDDY IRATEPIFDY LTKWSGLVPG DLDPALSPHH LTTHKAAYLK
1441 LRFLVDAGAI FVGHGLKKDF RMLNIVVPPA QVVDTVELFH FKRQRKLSLR FLAGYLLGAV
1501 IQKDTHDSIV DARTALSLFE VYKRLNAEGK FQEKLLEMYR WGKANGWDAA PAQQGPKP
//