LOCUS BDA40350.1 1908 aa PRT PLN 05-OCT-2021
DEFINITION Coccomyxa sp. Obi probable mediator of RNA polymerase
II transcription subunit 12 at N-terminal half protein.
ACCESSION AP024988-3
PROTEIN_ID BDA40350.1
SOURCE Coccomyxa sp. Obi
ORGANISM Coccomyxa sp. Obi
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes;
Trebouxiophyceae; Trebouxiophyceae incertae sedis; Elliptochloris
clade; Coccomyxa.
REFERENCE 1 (bases 1 to 3766449)
AUTHORS Harayama,S. and Ide,Y.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2021) to the DDBJ/EMBL/GenBank databases.
Contact:Shigeaki Harayama
Chuo University, Research and Development Initiative; 1-13-27
Kasuga, Bunkyo-ku, Tokyo 112-8551, Japan
REFERENCE 2
AUTHORS Harayama,S.
TITLE The genome sequence of the unicellular green alga, Coccomyxa sp.
strain Obi
JOURNAL Unpublished (2021)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: SMART Analysis v. 2.3.0.
Assembly Name :: COCOBI_1.0
Genome Coverage :: 170x
Sequencing Technology :: PacBio RSII
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /chromosome="1"
/db_xref="taxon:2315456"
/mol_type="genomic DNA"
/organism="Coccomyxa sp. Obi"
protein /locus_tag="COCOBI_01-0030"
/transl_table=1
intron_pos 24:0 (1/32)
intron_pos 77:0 (2/32)
intron_pos 162:0 (3/32)
intron_pos 211:2 (4/32)
intron_pos 264:1 (5/32)
intron_pos 319:2 (6/32)
intron_pos 359:0 (7/32)
intron_pos 439:0 (8/32)
intron_pos 483:0 (9/32)
intron_pos 537:1 (10/32)
intron_pos 595:0 (11/32)
intron_pos 640:0 (12/32)
intron_pos 761:1 (13/32)
intron_pos 804:0 (14/32)
intron_pos 896:1 (15/32)
intron_pos 941:2 (16/32)
intron_pos 974:2 (17/32)
intron_pos 1018:1 (18/32)
intron_pos 1094:2 (19/32)
intron_pos 1177:0 (20/32)
intron_pos 1227:1 (21/32)
intron_pos 1280:0 (22/32)
intron_pos 1335:1 (23/32)
intron_pos 1369:0 (24/32)
intron_pos 1423:2 (25/32)
intron_pos 1476:0 (26/32)
intron_pos 1518:0 (27/32)
intron_pos 1557:0 (28/32)
intron_pos 1621:0 (29/32)
intron_pos 1693:1 (30/32)
intron_pos 1750:2 (31/32)
intron_pos 1789:0 (32/32)
BEGIN
1 MAGFHQQPLS ATLGPPGVYP IDDDAEVHML NAATLQHGFK ESFEAALGIS EAKEVDLSLV
61 HRRELWEGPR GESLFQGVWQ QLQAAQAAQL DRQRAGRVYD VALGSADVSA DISIESDAFP
121 QPPREFRPPP GLGEVAVRAA HARLRALQSR WDLQLQRQWF KELARDTPLP NLARSMFLVH
181 PADPANLAWL AKFQVPPLRA AWYIRIHTIH RGEWHKGEDR LAVRARLWTG DLLRALDEVL
241 DQALPHSSPG SSPPPQPATP PLPCEQDTGS AEAVRQTSFD AWPFASDRPW VVPDLRAGFP
301 PSVGSGWHYY LSLAGYTYRE GLVDAEMLVS WLLNCVERAR RLPAVMVCLL PLLQLCMQEL
361 VQSQLHVRHL LDICCRHLAT TSAPLLEGNA TQRMHARAKV GIGLTLALRY VLVHCPQSLI
421 GLDLKPVQAA LDATALFEDH TCAGLTAAAA RAAVNAIAHQ ATALGCAVNV RVLSYDEAAA
481 VQALEDAMPL MGSAHLLQTL HGRLDRGVPS EEFPSLVVHL ACNWASSSSI PSPSSQGHIG
541 SATDPHGPQL PGVLPLRRLF VVDIIRQLAA HLRRQHSQEA ATQLPAGVPE PVLQEAVVQW
601 LGELQTTSRL EEAAAELAVD LAIAGLFCPG RYLSTLLARG LLDERRERQA GSSARHRAFL
661 RHLHPQLHLP TLTPPQPPPE KASGPSKTSR SMSLADAERG PPSIGKLQEK IVACGAAETA
721 PVLLQHQLSS ESISEISAAS KGTGPGLTLR RRSRSQQASS GERWSRARVE YARSRSVVLR
781 GIGAKRKRSA SIARENSARA SSEEGTSGLL QTKRLAGSKR KRRRRSTSGE GTPDEADELC
841 AEWARKASAY QPAAKSAERS AMEKSPSPDA AANGSSEADR NSSHDEASRS TESPQGDRAS
901 QRPVFRTVQK RVAAAMNLEL QALSAAPVTD LEFLSSVTRM RPWERRCLAR WLANEMRIAL
961 MWDGKIDSGR NWHRGDGWLL RGLAVIEEAG GLTEAAALLV LLISRMLRLR RLALPPSGAP
1021 DKMWQETGVS ERCLLAALAA RSRNFAAMGC LAKVLTAVTA WAFAKSGSPL TKEDGVLHFG
1081 EATAFAAALL CAYRANPGTA QWWSNLHKTQ PQHWLTGLLA ARLSSTPTTT DSSPVVALLP
1141 ATCQLSPALG SATSAASAQV LEEICAVLRS SDGISQVEAV AGHLAVQIGA VGAADPRLPD
1201 TEPSGLGVVC AAIVSSYLRI APHDPEGANA GIEGGGSAKQ REAHMQCLGQ VSFMMHRQGH
1261 QCISAWVQRS ICTALTTAKG EVEAKNAALF AAQCVVRGFI DMRCLLSQLV TWRTALGASL
1321 ASKLLTSACA QTAAGLGAGV ELEVRTLNLH HAQLPFQVAW GALGKHLMAE AEHGTQLGRL
1381 DKVVLMAILQ HAPIQACLLS KPRLLYELLS GFHVHNPDIY APLAAATALV MGQGGDDGVA
1441 RAGCNEERMV GLLRGTTAEN TPVTWLLLRC LLDDQLMTAA RKRMDSRRAQ EAAARAFAEA
1501 DAGMARIGEV EKTFTSQVLA TLLEQPGKGA LTARLTWALG RGIGEYLLQQ ADWLLQDTSS
1561 LLGHMSLADV LRKRCGVPRT EPEAACQNPT VEDISFGFAE LALTGLALSD QSRQRDFALQ
1621 IVQQLQTLGG LLKAPKQDLG LHNAASADAL QSKASGEEVD GNAARKPKGF GGGLGALRAR
1681 RLSATGLDRQ TVGSAEGVHA AIALRLKILM PLLPVVYADR ETDRTKNLRY MLARALLPIL
1741 ASPLVYASFR DSKADPDEGK AGTLFRQLLA VKHALLSPKW ATWLRGTQEK LRDVPAYEDS
1801 ATLAAGMKAL APPIWLRDVL HSAMHAIPAP LFAMPPAAPD LTASAKVAES PDGPERQDES
1861 NVTPGTELAA IVDPWFFDGG FAECLCAGGQ AKAPQWLQGA VRRRPEST
//