LOCUS BCM25966.1 637 aa PRT BCT 26-AUG-2021 DEFINITION Methyloradius palustris RNA polymerase sigma factor RpoD protein. ACCESSION AP024110-2225 PROTEIN_ID BCM25966.1 SOURCE Methyloradius palustris ORGANISM Methyloradius palustris Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales; Methylophilaceae; Methyloradius. REFERENCE 1 (bases 1 to 2800413) AUTHORS Miyadera,T. and Kojima,H. TITLE Direct Submission JOURNAL Submitted (19-OCT-2020) to the DDBJ/EMBL/GenBank databases. Contact:Hisaya Kojima Hokkaido University, Institute of Low Temperature Science, Microbial Ecology Group; nishi-8, kita-19, Sapporo, Hokkaido 060-0819, Japan URL :http://www.lowtem.hokudai.ac.jp/en/index.html REFERENCE 2 AUTHORS Miyadera,T., Kojima,H. and Fukui,M. TITLE Methyloradius palustris gen. nov., sp. nov., a methanol-oxidizing bacterium isolated from snow JOURNAL Arch. Microbiol. (2021) In press REMARK Publication Status: Available-Online prior to print DOI:10.21203/rs.3.rs-687530/v1 COMMENT Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 635x Sequencing Technology :: Oxford Nanopore GridION; MGI DNBSEQ-G400 ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2019" /country="Japan:Gunma, Ozegahara moor" /db_xref="taxon:2778876" /isolation_source="reddish brown snow from a moor" /lat_lon="36.9175 N 139.1988 E" /mol_type="genomic DNA" /organism="Methyloradius palustris" /strain="Zm11" /type_material="type strain of Methyloradius palustris" protein /gene="rpoD" /inference="COORDINATES:ab initio prediction:MetaGeneAnnotator" /inference="similar to AA sequence:UniProtKB:Q7VWM5" /locus_tag="ZMTM_22250" /transl_table=11 BEGIN 1 MAKEQQNENT NDNQVQVSDA DARRTRLKTL IILGKERGYL TYAEINDHLP DDVQDSEQID 61 GIIGMINDMG IQVYEEAPDA EVLLMSDAPA PVADEDAVEE AEQALSTVDS EFGRTTDPVR 121 MYMREMGTVD LLTREGEIEI AKRIEDGLKH MVQAIAACPT TIAELLAMVD RVEKDELSVD 181 DLVDGLIDSD VGIDDAIAAE AASEEEIEPE DEEDEEDDDG AKAAAISAEA LARLKEEVLI 241 RFAVIRESNK KMTAILEKSG SQDKEYQKLQ ALILDELTAF RFSAKQVEAL CDQVRGMVEE 301 VRGHERKIME FCVDKSGMPR AHFIKVFPGN ETNVEWLAGE LALTKPYVER LERFKHSIVD 361 QQQRLLDLQA RVGIPIKELK DINKQMTTGE ARARRAKREM IEANLRLVIS IAKKYTNRGL 421 QFLDLIQEGN IGLMKAVDKF EYRRGYKFST YATWWIRQAI TRSIADQART IRIPVHMIET 481 INKMNRISRQ ILQETGLEPD PATLAEKMEM PEDKIRKILK ISKEPISMET PIGDDDDSHL 541 GDFIEDMTTL APVDAAVYAS LRDATKEVLE SLTAREAKVL RMRFGIEMNT DHTLEEVGKQ 601 FDVTRERIRQ IEAKALRKLR HPTRSERLRS FLETGND //