LOCUS       BCM25966.1               637 aa    PRT              BCT 26-AUG-2021
DEFINITION  Methyloradius palustris RNA polymerase sigma factor RpoD protein.
ACCESSION   AP024110-2225
PROTEIN_ID  BCM25966.1
SOURCE      Methyloradius palustris
  ORGANISM  Methyloradius palustris
            Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
            Methylophilaceae; Methyloradius.
REFERENCE   1  (bases 1 to 2800413)
  AUTHORS   Miyadera,T. and Kojima,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2020) to the DDBJ/EMBL/GenBank databases.
            Contact:Hisaya Kojima
            Hokkaido University, Institute of Low Temperature Science,
            Microbial Ecology Group; nishi-8, kita-19, Sapporo, Hokkaido
            060-0819, Japan
            URL    :http://www.lowtem.hokudai.ac.jp/en/index.html
REFERENCE   2
  AUTHORS   Miyadera,T., Kojima,H. and Fukui,M.
  TITLE     Methyloradius palustris gen. nov., sp. nov., a methanol-oxidizing
            bacterium isolated from snow
  JOURNAL   Arch. Microbiol. (2021) In press
  REMARK    Publication Status: Available-Online prior to print
            DOI:10.21203/rs.3.rs-687530/v1
COMMENT     Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.7
            Genome Coverage       :: 635x
            Sequencing Technology :: Oxford Nanopore GridION; MGI DNBSEQ-G400
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2019"
                     /country="Japan:Gunma, Ozegahara moor"
                     /db_xref="taxon:2778876"
                     /isolation_source="reddish brown snow from a moor"
                     /lat_lon="36.9175 N 139.1988 E"
                     /mol_type="genomic DNA"
                     /organism="Methyloradius palustris"
                     /strain="Zm11"
                     /type_material="type strain of Methyloradius palustris"
     protein         /gene="rpoD"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:UniProtKB:Q7VWM5"
                     /locus_tag="ZMTM_22250"
                     /transl_table=11
BEGIN
        1 MAKEQQNENT NDNQVQVSDA DARRTRLKTL IILGKERGYL TYAEINDHLP DDVQDSEQID
       61 GIIGMINDMG IQVYEEAPDA EVLLMSDAPA PVADEDAVEE AEQALSTVDS EFGRTTDPVR
      121 MYMREMGTVD LLTREGEIEI AKRIEDGLKH MVQAIAACPT TIAELLAMVD RVEKDELSVD
      181 DLVDGLIDSD VGIDDAIAAE AASEEEIEPE DEEDEEDDDG AKAAAISAEA LARLKEEVLI
      241 RFAVIRESNK KMTAILEKSG SQDKEYQKLQ ALILDELTAF RFSAKQVEAL CDQVRGMVEE
      301 VRGHERKIME FCVDKSGMPR AHFIKVFPGN ETNVEWLAGE LALTKPYVER LERFKHSIVD
      361 QQQRLLDLQA RVGIPIKELK DINKQMTTGE ARARRAKREM IEANLRLVIS IAKKYTNRGL
      421 QFLDLIQEGN IGLMKAVDKF EYRRGYKFST YATWWIRQAI TRSIADQART IRIPVHMIET
      481 INKMNRISRQ ILQETGLEPD PATLAEKMEM PEDKIRKILK ISKEPISMET PIGDDDDSHL
      541 GDFIEDMTTL APVDAAVYAS LRDATKEVLE SLTAREAKVL RMRFGIEMNT DHTLEEVGKQ
      601 FDVTRERIRQ IEAKALRKLR HPTRSERLRS FLETGND
//