LOCUS       BCM24627.1               448 aa    PRT              BCT 26-AUG-2021
DEFINITION  Methyloradius palustris 23S rRNA (uracil(1939)-C(5))-methyltransfera
            se RlmD protein.
ACCESSION   AP024110-886
PROTEIN_ID  BCM24627.1
SOURCE      Methyloradius palustris
  ORGANISM  Methyloradius palustris
            Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
            Methylophilaceae; Methyloradius.
REFERENCE   1  (bases 1 to 2800413)
  AUTHORS   Miyadera,T. and Kojima,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2020) to the DDBJ/EMBL/GenBank databases.
            Contact:Hisaya Kojima
            Hokkaido University, Institute of Low Temperature Science,
            Microbial Ecology Group; nishi-8, kita-19, Sapporo, Hokkaido
            060-0819, Japan
            URL    :http://www.lowtem.hokudai.ac.jp/en/index.html
REFERENCE   2
  AUTHORS   Miyadera,T., Kojima,H. and Fukui,M.
  TITLE     Methyloradius palustris gen. nov., sp. nov., a methanol-oxidizing
            bacterium isolated from snow
  JOURNAL   Arch. Microbiol. (2021) In press
  REMARK    Publication Status: Available-Online prior to print
            DOI:10.21203/rs.3.rs-687530/v1
COMMENT     Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.7
            Genome Coverage       :: 635x
            Sequencing Technology :: Oxford Nanopore GridION; MGI DNBSEQ-G400
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2019"
                     /country="Japan:Gunma, Ozegahara moor"
                     /db_xref="taxon:2778876"
                     /isolation_source="reddish brown snow from a moor"
                     /lat_lon="36.9175 N 139.1988 E"
                     /mol_type="genomic DNA"
                     /organism="Methyloradius palustris"
                     /strain="Zm11"
                     /type_material="type strain of Methyloradius palustris"
     protein         /gene="rlmD"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:UniProtKB:Q62JV9"
                     /locus_tag="ZMTM_08860"
                     /transl_table=11
BEGIN
        1 MNNSSNQNNS QPKINAEIES LDQEGRGVAH VEGKTIFIDG ALPGEIVTYI STRKKSSYEF
       61 AHVDQIIKAS NLRTTPKCKH FGQCGGCSIQ HLEFSGQVAA KQRMLESNLK HIGKVKAEAI
      121 LPPLYGPAWG YRHKARLRVK YVEKKQRVLV GFNEKATRFV ADIQSCDVLV PSVSKLIMPL
      181 QELIIKLSLR DRIPQIEVAV GEHAIVLVLR IMDPLAPADE PLLRAFADEY QVQIWTQSKG
      241 PDTVMPFYPL DGAALSYSLP EYNLTYPFKP TEFTQVNPHI NKVMLRRAMQ LLKPNADERI
      301 ADFFCGLGNF TLPIARSGAK VFGFEGSAAL VSRAVESASL NDLHSEVSFS EADLFKITPE
      361 SLNMLGYFDK WLIDPPRDGA MELVKALPED HNMIPKAIVY VSCNPATLAR DAGILVNEKG
      421 YVLKAAGVIN MFPHTSHVES IALFELAS
//