LOCUS       BCM24013.1              1411 aa    PRT              BCT 26-AUG-2021
DEFINITION  Methyloradius palustris DNA-directed RNA polymerase subunit
            beta' protein.
ACCESSION   AP024110-272
PROTEIN_ID  BCM24013.1
SOURCE      Methyloradius palustris
  ORGANISM  Methyloradius palustris
            Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
            Methylophilaceae; Methyloradius.
REFERENCE   1  (bases 1 to 2800413)
  AUTHORS   Miyadera,T. and Kojima,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2020) to the DDBJ/EMBL/GenBank databases.
            Contact:Hisaya Kojima
            Hokkaido University, Institute of Low Temperature Science,
            Microbial Ecology Group; nishi-8, kita-19, Sapporo, Hokkaido
            060-0819, Japan
            URL    :http://www.lowtem.hokudai.ac.jp/en/index.html
REFERENCE   2
  AUTHORS   Miyadera,T., Kojima,H. and Fukui,M.
  TITLE     Methyloradius palustris gen. nov., sp. nov., a methanol-oxidizing
            bacterium isolated from snow
  JOURNAL   Arch. Microbiol. (2021) In press
  REMARK    Publication Status: Available-Online prior to print
            DOI:10.21203/rs.3.rs-687530/v1
COMMENT     Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.7
            Genome Coverage       :: 635x
            Sequencing Technology :: Oxford Nanopore GridION; MGI DNBSEQ-G400
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2019"
                     /country="Japan:Gunma, Ozegahara moor"
                     /db_xref="taxon:2778876"
                     /isolation_source="reddish brown snow from a moor"
                     /lat_lon="36.9175 N 139.1988 E"
                     /mol_type="genomic DNA"
                     /organism="Methyloradius palustris"
                     /strain="Zm11"
                     /type_material="type strain of Methyloradius palustris"
     protein         /gene="rpoC"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:UniProtKB:K0M7U6"
                     /locus_tag="ZMTM_02720"
                     /transl_table=11
BEGIN
        1 MKALLDLFKQ VTQEEEFDAI KIALASPEKI RSWSYGEVKK PETINYRTFK PERDGLFCAK
       61 IFGPIKDYEC LCGKYKRLKH RGVICEKCGV EVTLSKVRRE RMAHIELASP VAHIWFLKSL
      121 PSRLGMVLDI ALRDIERVLY FEAYIVIDPG MTPLTRGQLL TEDDYLAKVE EYGDEFNAVM
      181 GAEAVRELLR TMDVHSEIER QRREITETGS EAKIKKISKR LKVLEAFQKS GIKPEWMILE
      241 VLPVLPPELR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLELKAPEI IVRNEKRMLQ
      301 EAVDSLLDNG RRGKVMTGAN KRPLKSLADM IKGKGGRFRQ NLLGKRVDYS GRSVIVVGPQ
      361 LKLHQCGLPK KMALELFKPF IFHKLEVLGL ATTIKAAKKK VEEEGPEVWD ILEDVIREHP
      421 VLLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCAAFNAD FDGDQMAVHV PLSLEAQMEA
      481 RTLMLASNNV LSPANGEPII VPSQDIVLGL YYMTREKVNA RGEGMRFANV NEVQRVYDAG
      541 LIDLHAKVTV RIKEYEVDLN GDKHEKINRY ETTVGRALLS EILPAGLPFS TIDRALKKKE
      601 ISKLINAGFR KVGIRETVIL ADKLMTMGYT YATRAGISIS INDMLVPPEK EQLIASAEAE
      661 VKEIENQYVS GLVTQGERYN KVVDIWGRAG DKVADAMMKQ LREEPVLDAD GNVTKDASGK
      721 VIKQESFNAI YMMADSGARG SAAQVRQLAG MRGLMAKPDG SIIETPITAN FRDGLNVLQY
      781 FISTHGARKG LADTALKTAN SGYLTRRLVD VTQDLVVTEH DCGTIDGLVT KALVKGGEVI
      841 EPLHDRILGR VTAIDLVNPE TQEVVYPAGT LLTEDEVENI DALGIDEVKV RTALTCDTRY
      901 GICAKCYGRD LGRGRLINMG EAVGVIAAQS IGEPGTQLTM RTFHIGGAVS RAASISQVEG
      961 KSNGVVRFTS TMRYVTNARN EQVVISRNGE AMIQDENGRE RERHKVPYGA TLQLLDGKTV
     1021 KAGQALATWD PHTRPIITEY AGKIKFENVE EGITVAKQID DVTGLSSLVV IDPKQRAGQS
     1081 KGLRPQVKLL DANGVEVKVS GGETPVNITF QLGCIITVKD GQEVGVGEVL ARIPQESSKT
     1141 RDITGGLPRV AELFEARSPK DAGLLAEVTG TVSFGKDTKG KQRLVFTDLD GITHEYLIPK
     1201 DKHVTAHDGQ VVTKGESIVD GPADPQDILR LQGREALARY IIDEVQDVYR LQGVKINDKH
     1261 IEVIVRQMLR RVRVSDAGET NFILGEQVER ADLLAENERV TAINKRPASF EYVLLGITKA
     1321 SLSTDSFISA ASFQETTRVL TEAAILGKRD ELRGLKENVI VGRLIPAGTG LAYHETRRRQ
     1381 AAGTDAAPSV IEAAEPEVAP VIETTGDAEV A
//