LOCUS BCB25588.1 628 aa PRT BCT 16-APR-2021 DEFINITION Sulfurimicrobium lacus RNA polymerase sigma factor RpoD protein. ACCESSION AP022853-474 PROTEIN_ID BCB25588.1 SOURCE Sulfurimicrobium lacus ORGANISM Sulfurimicrobium lacus Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales; Sulfuricellaceae; Sulfurimicrobium. REFERENCE 1 (bases 1 to 3826324) AUTHORS Kanda,M. and Kojima,H. TITLE Direct Submission JOURNAL Submitted (13-MAR-2020) to the DDBJ/EMBL/GenBank databases. Contact:Hisaya Kojima Hokkaido University, The Institute of Low Temperature Science; Kita-19, Nishi-8, Kita-ku, Sapporo, Hokkaido 060-0819, Japan REFERENCE 2 AUTHORS Kojima,H., Kanda,M., Umezawa,K. and Fukui,M. TITLE Sulfurimicrobium lacus gen. nov., sp. nov., a sulfur oxidizer isolated from lake water, and review of the family Sulfuricellaceae to show that it is not a later synonym of Gallionellaceae JOURNAL Arch. Microbiol. 203, 317-323 (2021) REMARK DOI:10.1007/s00203-020-02029-0 COMMENT Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: unknown Sequencing Technology :: Illumina Nextseq; Oxford Nanopore GridION ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2014-06-19" /country="Japan:Yamanashi, Mizugaki lake" /db_xref="taxon:2715678" /isolation_source="lake water" /lat_lon="35.8597 N 138.4995 E" /mol_type="genomic DNA" /organism="Sulfurimicrobium lacus" /strain="skT11" /type_material="type strain of Sulfurimicrobium lacus" protein /gene="rpoD" /inference="COORDINATES:ab initio prediction:MetaGeneAnnotator" /inference="similar to AA sequence:UniProtKB:Q63JG1" /locus_tag="SKTS_04740" /transl_table=11 BEGIN 1 MATENGKMDD RVNDADARRM RLKNLIVLGK ERGYLTYAEI NDHLPDDMLD AEQIEGVISM 61 IGDMGIAVYD EAPDAETLLM SDATPAVADE DAVEEAEAAL STVDSEFGRT TDPVRMYMRE 121 MGTVDLLTRE GEIEIAKRIE DGLKHMVQAI SACPTTIAEI LRLAEMIERD ELRVDELVDG 181 LINGQSADEF SEEMAAAEEA EPEAEISEEE AEAAGAAIAA ANLAQLKADA LERFAVIREA 241 FDKMMQALQK KGPRSKAYME VQEQISNELM GIRFSVKQVE ALCDGLRGLV EEVRGHERSI 301 MDLCVTKGGM PRPHFIQVFP GNESNLDWVV GEIGSGKPYS EKLGRFQHAV VDQQQRLTDV 361 QTKVGIPLKD LKEINRQMST GEAKARRAKR EMIEANLRLV ISIAKKYTNR GLQFLDLIQE 421 GNIGLMKAVD KFEYRRGYKF STYATWWIRQ AITRSIADQA RTIRIPVHMI ETINKMNRIS 481 RQILQETGQE ADPALLAEKM EMPEEKIRKI LKISKEPISM ETPIGDDEDS HLGDFIEDVS 541 TLAPADAAMY ASLREATKEV LESLTPREAK VLRMRFGIEM NTDHTLEEVG KQFDVTRERI 601 RQIEAKALRK LRHPSRSERL RSFLDNEG //