LOCUS       BCB25588.1               628 aa    PRT              BCT 16-APR-2021
DEFINITION  Sulfurimicrobium lacus RNA polymerase sigma factor RpoD protein.
ACCESSION   AP022853-474
PROTEIN_ID  BCB25588.1
SOURCE      Sulfurimicrobium lacus
  ORGANISM  Sulfurimicrobium lacus
            Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
            Sulfuricellaceae; Sulfurimicrobium.
REFERENCE   1  (bases 1 to 3826324)
  AUTHORS   Kanda,M. and Kojima,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2020) to the DDBJ/EMBL/GenBank databases.
            Contact:Hisaya Kojima
            Hokkaido University, The Institute of Low Temperature Science;
            Kita-19, Nishi-8, Kita-ku, Sapporo, Hokkaido 060-0819, Japan
REFERENCE   2
  AUTHORS   Kojima,H., Kanda,M., Umezawa,K. and Fukui,M.
  TITLE     Sulfurimicrobium lacus gen. nov., sp. nov., a sulfur oxidizer
            isolated from lake water, and review of the family
            Sulfuricellaceae to show that it is not a later synonym of
            Gallionellaceae
  JOURNAL   Arch. Microbiol. 203, 317-323 (2021)
  REMARK    DOI:10.1007/s00203-020-02029-0
COMMENT     Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.7
            Genome Coverage       :: unknown
            Sequencing Technology :: Illumina Nextseq; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2014-06-19"
                     /country="Japan:Yamanashi, Mizugaki lake"
                     /db_xref="taxon:2715678"
                     /isolation_source="lake water"
                     /lat_lon="35.8597 N 138.4995 E"
                     /mol_type="genomic DNA"
                     /organism="Sulfurimicrobium lacus"
                     /strain="skT11"
                     /type_material="type strain of Sulfurimicrobium lacus"
     protein         /gene="rpoD"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:UniProtKB:Q63JG1"
                     /locus_tag="SKTS_04740"
                     /transl_table=11
BEGIN
        1 MATENGKMDD RVNDADARRM RLKNLIVLGK ERGYLTYAEI NDHLPDDMLD AEQIEGVISM
       61 IGDMGIAVYD EAPDAETLLM SDATPAVADE DAVEEAEAAL STVDSEFGRT TDPVRMYMRE
      121 MGTVDLLTRE GEIEIAKRIE DGLKHMVQAI SACPTTIAEI LRLAEMIERD ELRVDELVDG
      181 LINGQSADEF SEEMAAAEEA EPEAEISEEE AEAAGAAIAA ANLAQLKADA LERFAVIREA
      241 FDKMMQALQK KGPRSKAYME VQEQISNELM GIRFSVKQVE ALCDGLRGLV EEVRGHERSI
      301 MDLCVTKGGM PRPHFIQVFP GNESNLDWVV GEIGSGKPYS EKLGRFQHAV VDQQQRLTDV
      361 QTKVGIPLKD LKEINRQMST GEAKARRAKR EMIEANLRLV ISIAKKYTNR GLQFLDLIQE
      421 GNIGLMKAVD KFEYRRGYKF STYATWWIRQ AITRSIADQA RTIRIPVHMI ETINKMNRIS
      481 RQILQETGQE ADPALLAEKM EMPEEKIRKI LKISKEPISM ETPIGDDEDS HLGDFIEDVS
      541 TLAPADAAMY ASLREATKEV LESLTPREAK VLRMRFGIEM NTDHTLEEVG KQFDVTRERI
      601 RQIEAKALRK LRHPSRSERL RSFLDNEG
//