LOCUS       BCA76731.1               705 aa    PRT              BCT 06-NOV-2020
DEFINITION  Escherichia coli conjugative coupling factor TraD, PFGI-
            1 class protein.
ACCESSION   AP022815-4761
PROTEIN_ID  BCA76731.1
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5327513)
  AUTHORS   Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2020) to the DDBJ/EMBL/GenBank databases.
            Contact:Ken-ichi Lee
            National Institute of Infectious Diseases, Deaprtment of
            Bacteriology I; 1-23-1,Toyama, Shinjuku, Tokyo 162-8640, Japan
REFERENCE   2
  AUTHORS   Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S.
  TITLE     Global distribution of epidemic-related Shiga toxin 2 encoding
            phages among enteroaggregative Escherichia coli
  JOURNAL   Sci. Rep. 10, 11738 (2020)
  REMARK    Publication Status: Online-Only
            DOI:10.1038/s41598-020-68462-9
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.7
            Genome Coverage       :: 135.0X
            Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2014"
                     /db_xref="taxon:562"
                     /host="Homo sapiens"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli"
                     /strain="JE86-ST05"
     protein         /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:RefSeq:WP_001283927.1"
                     /locus_tag="JE86ST05C_47600"
                     /note="MGA_4774"
                     /note="WP_001283927.1 conjugative coupling factor TraD,
                     PFGI-1 class (Escherichia coli O83:H1 str. NRG 857C)
                     [pid:68.1%, q_cov:97.0%, s_cov:98.1%, Eval:1.2e-275]"
                     /transl_table=11
BEGIN
        1 MSNRYVIEAL LRPAVEFNTA VVAATAAGVC VTAPWAVALA PSVSYVTAAG FGVLAAVRFR
       61 QGMKIIRYRR NLRRLPRYVM STRQIPVSRQ RLFLGRGFRW TQKHTQRLQD TLRPEVAHYL
      121 LPGGLYRAAR WLEMKTEHRL PGLGQWLRRD SPLNPVRPLP PVGGNPALHG IEPDEQDVTL
      181 ALGERVGHTI VYGTTRVGKT RLAELLVTQD IRRGEVTIVF DPKGDADLLL RVWAEAHRAG
      241 RGDELYIFHL GWPEISARYN AVGRFGRVSE VASRVAGQLS GEGNSAAFRE FAWRFVNIIA
      301 RALVALGERP DYMLIMRYVN NIADLYIRYA GKVIRERLPG LEQIIANNQS VLSEDDVPRT
      361 MQNQPDAVRI WSIEMALSSE EGKKIYDPIL DGLRSAVRYD RTYFDKIVAS LLPLLEKLTT
      421 GRIAELLAPD YLDMSDARPI FDWEQVIRKK AVVYIGLDAL SDSEVASAVG NSMFADLVSV
      481 AGHIYKHGMH AGLPAGGAGK NVVNLHCDEF NELMGDEFIP LINKGGGAGM QVTAYTQTSS
      541 DIEARIGNAA KTAQVQGNFN NMIMLRVREN RTAELLTTQL PQVEIYTKTL VSGHQDTADV
      601 SAGQDFTSST QDRVGTVKVP LLEPADIVTL PKGQAFALLE GGQLWKIRMP LPAGDTDDVL
      661 MPESISRVAE AMRQNYHSGE GWWNAPPSVQ AIATEEGGDH GGSTS
//