LOCUS BCA76731.1 705 aa PRT BCT 06-NOV-2020 DEFINITION Escherichia coli conjugative coupling factor TraD, PFGI- 1 class protein. ACCESSION AP022815-4761 PROTEIN_ID BCA76731.1 SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5327513) AUTHORS Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S. TITLE Direct Submission JOURNAL Submitted (21-FEB-2020) to the DDBJ/EMBL/GenBank databases. Contact:Ken-ichi Lee National Institute of Infectious Diseases, Deaprtment of Bacteriology I; 1-23-1,Toyama, Shinjuku, Tokyo 162-8640, Japan REFERENCE 2 AUTHORS Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S. TITLE Global distribution of epidemic-related Shiga toxin 2 encoding phages among enteroaggregative Escherichia coli JOURNAL Sci. Rep. 10, 11738 (2020) REMARK Publication Status: Online-Only DOI:10.1038/s41598-020-68462-9 COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 135.0X Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2014" /db_xref="taxon:562" /host="Homo sapiens" /mol_type="genomic DNA" /organism="Escherichia coli" /strain="JE86-ST05" protein /inference="COORDINATES:ab initio prediction:MetaGeneAnnotator" /inference="similar to AA sequence:RefSeq:WP_001283927.1" /locus_tag="JE86ST05C_47600" /note="MGA_4774" /note="WP_001283927.1 conjugative coupling factor TraD, PFGI-1 class (Escherichia coli O83:H1 str. NRG 857C) [pid:68.1%, q_cov:97.0%, s_cov:98.1%, Eval:1.2e-275]" /transl_table=11 BEGIN 1 MSNRYVIEAL LRPAVEFNTA VVAATAAGVC VTAPWAVALA PSVSYVTAAG FGVLAAVRFR 61 QGMKIIRYRR NLRRLPRYVM STRQIPVSRQ RLFLGRGFRW TQKHTQRLQD TLRPEVAHYL 121 LPGGLYRAAR WLEMKTEHRL PGLGQWLRRD SPLNPVRPLP PVGGNPALHG IEPDEQDVTL 181 ALGERVGHTI VYGTTRVGKT RLAELLVTQD IRRGEVTIVF DPKGDADLLL RVWAEAHRAG 241 RGDELYIFHL GWPEISARYN AVGRFGRVSE VASRVAGQLS GEGNSAAFRE FAWRFVNIIA 301 RALVALGERP DYMLIMRYVN NIADLYIRYA GKVIRERLPG LEQIIANNQS VLSEDDVPRT 361 MQNQPDAVRI WSIEMALSSE EGKKIYDPIL DGLRSAVRYD RTYFDKIVAS LLPLLEKLTT 421 GRIAELLAPD YLDMSDARPI FDWEQVIRKK AVVYIGLDAL SDSEVASAVG NSMFADLVSV 481 AGHIYKHGMH AGLPAGGAGK NVVNLHCDEF NELMGDEFIP LINKGGGAGM QVTAYTQTSS 541 DIEARIGNAA KTAQVQGNFN NMIMLRVREN RTAELLTTQL PQVEIYTKTL VSGHQDTADV 601 SAGQDFTSST QDRVGTVKVP LLEPADIVTL PKGQAFALLE GGQLWKIRMP LPAGDTDDVL 661 MPESISRVAE AMRQNYHSGE GWWNAPPSVQ AIATEEGGDH GGSTS //