LOCUS       BCA76343.1               295 aa    PRT              BCT 06-NOV-2020
DEFINITION  Escherichia coli chloramphenicol resistance permease RarD protein.
ACCESSION   AP022815-4373
PROTEIN_ID  BCA76343.1
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5327513)
  AUTHORS   Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2020) to the DDBJ/EMBL/GenBank databases.
            Contact:Ken-ichi Lee
            National Institute of Infectious Diseases, Deaprtment of
            Bacteriology I; 1-23-1,Toyama, Shinjuku, Tokyo 162-8640, Japan
REFERENCE   2
  AUTHORS   Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S.
  TITLE     Global distribution of epidemic-related Shiga toxin 2 encoding
            phages among enteroaggregative Escherichia coli
  JOURNAL   Sci. Rep. 10, 11738 (2020)
  REMARK    Publication Status: Online-Only
            DOI:10.1038/s41598-020-68462-9
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.7
            Genome Coverage       :: 135.0X
            Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2014"
                     /db_xref="taxon:562"
                     /host="Homo sapiens"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli"
                     /strain="JE86-ST05"
     protein         /gene="rarD"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:INSD:ABB68289.1"
                     /locus_tag="JE86ST05C_43720"
                     /note="DFAST-ECOLI:ABB68289.1 chloramphenicol resistance
                     permease RarD [pid:99.7%, q_cov:99.7%, s_cov:97.7%,
                     Eval:1.8e-167]"
                     /note="MGA_4380"
                     /transl_table=11
BEGIN
        1 MDAKQTRQGV LLALAAYFIW GIAPAYFKLI YYVPADEILT HRVIWSFFFM VVLMSICRQW
       61 SYLKTLIQTP QKIFMLAVSA VLIGGNWLLF IWAVNNHHML EASLGYFINP LVNIVLGMIF
      121 LGERFRRMQW LAVILAICGV LVQLWTFGSL PIIALGLAFS FAFYGLVRKK IAVEAQTGML
      181 IETMWLLPVA AIYLFAIADS STSHMGQNPM SLNLLLIAAG IVTTVPLLCF TAAATRLRLS
      241 TLGFFQYIGP TLMFLLAVTF YGEKPGADKM VTFAFIWVAL AIFVMDAIYT QRRKS
//