LOCUS BCA76343.1 295 aa PRT BCT 06-NOV-2020 DEFINITION Escherichia coli chloramphenicol resistance permease RarD protein. ACCESSION AP022815-4373 PROTEIN_ID BCA76343.1 SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5327513) AUTHORS Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S. TITLE Direct Submission JOURNAL Submitted (21-FEB-2020) to the DDBJ/EMBL/GenBank databases. Contact:Ken-ichi Lee National Institute of Infectious Diseases, Deaprtment of Bacteriology I; 1-23-1,Toyama, Shinjuku, Tokyo 162-8640, Japan REFERENCE 2 AUTHORS Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S. TITLE Global distribution of epidemic-related Shiga toxin 2 encoding phages among enteroaggregative Escherichia coli JOURNAL Sci. Rep. 10, 11738 (2020) REMARK Publication Status: Online-Only DOI:10.1038/s41598-020-68462-9 COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 135.0X Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2014" /db_xref="taxon:562" /host="Homo sapiens" /mol_type="genomic DNA" /organism="Escherichia coli" /strain="JE86-ST05" protein /gene="rarD" /inference="COORDINATES:ab initio prediction:MetaGeneAnnotator" /inference="similar to AA sequence:INSD:ABB68289.1" /locus_tag="JE86ST05C_43720" /note="DFAST-ECOLI:ABB68289.1 chloramphenicol resistance permease RarD [pid:99.7%, q_cov:99.7%, s_cov:97.7%, Eval:1.8e-167]" /note="MGA_4380" /transl_table=11 BEGIN 1 MDAKQTRQGV LLALAAYFIW GIAPAYFKLI YYVPADEILT HRVIWSFFFM VVLMSICRQW 61 SYLKTLIQTP QKIFMLAVSA VLIGGNWLLF IWAVNNHHML EASLGYFINP LVNIVLGMIF 121 LGERFRRMQW LAVILAICGV LVQLWTFGSL PIIALGLAFS FAFYGLVRKK IAVEAQTGML 181 IETMWLLPVA AIYLFAIADS STSHMGQNPM SLNLLLIAAG IVTTVPLLCF TAAATRLRLS 241 TLGFFQYIGP TLMFLLAVTF YGEKPGADKM VTFAFIWVAL AIFVMDAIYT QRRKS //