LOCUS BCA72024.1 784 aa PRT BCT 06-NOV-2020 DEFINITION Escherichia coli LPS assembly OM complex LptDE beta-barrel component protein. ACCESSION AP022815-54 PROTEIN_ID BCA72024.1 SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5327513) AUTHORS Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S. TITLE Direct Submission JOURNAL Submitted (21-FEB-2020) to the DDBJ/EMBL/GenBank databases. Contact:Ken-ichi Lee National Institute of Infectious Diseases, Deaprtment of Bacteriology I; 1-23-1,Toyama, Shinjuku, Tokyo 162-8640, Japan REFERENCE 2 AUTHORS Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S. TITLE Global distribution of epidemic-related Shiga toxin 2 encoding phages among enteroaggregative Escherichia coli JOURNAL Sci. Rep. 10, 11738 (2020) REMARK Publication Status: Online-Only DOI:10.1038/s41598-020-68462-9 COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 135.0X Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2014" /db_xref="taxon:562" /host="Homo sapiens" /mol_type="genomic DNA" /organism="Escherichia coli" /strain="JE86-ST05" protein /gene="lptD" /inference="COORDINATES:ab initio prediction:MetaGeneAnnotator" /inference="similar to AA sequence:INSD:ACB17180.1" /locus_tag="JE86ST05C_00540" /note="DFAST-ECOLI:ACB17180.1 LPS assembly OM complex LptDE beta-barrel component [pid:95.8%, q_cov:100.0%, s_cov:100.0%, Eval:0.0e+00]" /note="MGA_54" /transl_table=11 BEGIN 1 MKKRIPTLLA TMIATALYSQ QGLAADLASQ CMLGVPSYDR PLVQGDTNDL PVTINADHAK 61 GDYPDDAVFT GSVDIMQGNS RLQADEVQLH QKEAPGQPEP VRTVDALGNV HYDDNQVILK 121 GPKGWANLNT KDTNVWEGDY QMVGRQGRGK ADLMKQRGEN RYTILDNGSF TSCLPGSDTW 181 SVVGSEIIHD REEQVAEIWN ARFKVGPVPI FYSPYLQLPV GDKRRSGFLI PNAKYTTTNY 241 FEFYLPYYWN IAPNMDATIT PHYMHRRGNI MWENEFRYLS QAGAGLMELD YLPSDKVYED 301 EHPNDDSSRR WLFYWNHSGV MDQVWRFNVD YTKVSDPSYF NDFDNKYGSS TDGYATQKFS 361 VGYAVQNFNA TVSTKQFQVF SEQNTSSYSA EPQLDVNYYQ NDVGPFDTRI YGQAVHFVNT 421 RDDMPEATRV HLEPTINLPL SNNWGSINTE AKLLATHYQQ TNLDWYNSRN TTKLDESVNR 481 VMPQFKVDGK MVFERDMEML APGYTQTLEP RAQYLYVPYR DQSDIYNYDS SLLQSDYSGL 541 FRDRTYGGLD RIASANQVTT GVTSRIYDDA AVERFNISVG QIYYFTESRT GDDNITWEND 601 DKTGSLVWAG DTYWRISERW GLRGGIQYDT RLDNVATSNS SIEYRRDEDR LVQLNYRYAS 661 PEYIQATLPK YYSTAEQYKN GISQVGAVAS WPIADRWSIV GAYYYDTNAN KQADSMLGVQ 721 YSSCCYAIRV GYERKLNGWD NDKQHAVYDN AIGFNIELRG LSSNYGLGTQ EMLRSNILPY 781 QNTL //