LOCUS       BCA68131.1               319 aa    PRT              BCT 06-NOV-2020
DEFINITION  Escherichia coli L,D-transpeptidase linking Lpp to murein protein.
ACCESSION   AP022811-1455
PROTEIN_ID  BCA68131.1
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5283470)
  AUTHORS   Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2020) to the DDBJ/EMBL/GenBank databases.
            Contact:Ken-ichi Lee
            National Institute of Infectious Diseases, Deaprtment of
            Bacteriology I; 1-23-1,Toyama, Shinjuku, Tokyo 162-8640, Japan
REFERENCE   2
  AUTHORS   Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S.
  TITLE     Global distribution of epidemic-related Shiga toxin 2 encoding
            phages among enteroaggregative Escherichia coli
  JOURNAL   Sci. Rep. 10, 11738 (2020)
  REMARK    Publication Status: Online-Only
            DOI:10.1038/s41598-020-68462-9
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.7
            Genome Coverage       :: 117.0X
            Sequencing Technology :: Illumina MiSeq, PacBio RSII
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="1999"
                     /db_xref="taxon:562"
                     /host="Homo sapiens"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli"
                     /strain="JE86-ST02"
     protein         /gene="ldtC"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:INSD:AAN79857.1"
                     /locus_tag="JE86ST02C_14550"
                     /note="DFAST-ECOLI:AAN79857.1 L,D-transpeptidase linking
                     Lpp to murein [pid:96.6%, q_cov:100.0%, s_cov:84.6%,
                     Eval:1.5e-178]"
                     /note="MGA_1456"
                     /note="frameshifted, insertion at around 1479738"
                     /transl_table=11
BEGIN
        1 MIKTRFSRWL TFFTFAAAVA LALPAKANTW PLPPAGSRLV GENKFHVVEN DGGSLEAIAK
       61 KYNVGFLALL QANPGVDPYV PRAGSVLTIP LQTLLPDAPR EGIVINIAEL RLYYYPPGKN
      121 SVTVYPIGIG QLGGDTLTPT MVTTVSDKRA NPTWTPTANI RARYKAQGIE LPAVVPAGPD
      181 NPMGHHAIRL AAYGGVYLLH GTNADFGIGM RVSSGCIRLR DDDIKTLFSQ VTPGTKVNII
      241 NTPIKVSAEP NGARLVEVHQ PLSEKIDDDP QLLPITLNSA MQSFKDAAQT DAEVMQHVMD
      301 VRSGMPVDVR RHQVSPQTL
//