LOCUS BCA67254.1 820 aa PRT BCT 06-NOV-2020 DEFINITION Escherichia coli outer membrane usher protein FimD protein. ACCESSION AP022811-578 PROTEIN_ID BCA67254.1 SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5283470) AUTHORS Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S. TITLE Direct Submission JOURNAL Submitted (21-FEB-2020) to the DDBJ/EMBL/GenBank databases. Contact:Ken-ichi Lee National Institute of Infectious Diseases, Deaprtment of Bacteriology I; 1-23-1,Toyama, Shinjuku, Tokyo 162-8640, Japan REFERENCE 2 AUTHORS Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S. TITLE Global distribution of epidemic-related Shiga toxin 2 encoding phages among enteroaggregative Escherichia coli JOURNAL Sci. Rep. 10, 11738 (2020) REMARK Publication Status: Online-Only DOI:10.1038/s41598-020-68462-9 COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 117.0X Sequencing Technology :: Illumina MiSeq, PacBio RSII ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="1999" /db_xref="taxon:562" /host="Homo sapiens" /mol_type="genomic DNA" /organism="Escherichia coli" /strain="JE86-ST02" protein /gene="fimD_1" /inference="COORDINATES:ab initio prediction:MetaGeneAnnotator" /inference="similar to AA sequence:INSD:BAB34017.1" /locus_tag="JE86ST02C_05780" /note="DFAST-ECOLI:BAB34017.1 outer membrane usher proteinFimD [pid:97.9%, q_cov:99.0%, s_cov:93.4%, Eval:0.0e+00]" /note="MGA_579" /transl_table=11 BEGIN 1 MKIPTTTDIP QRYTWCLAGI CYSSLAILPS FLSYAESYFN PAFLLENGTS VADLSRFERG 61 NHQPARVYRV DLWRNDEFIG SQDIVFESTT ENTGDKSGGL MPCFNQVLLE RIGLNSSAFP 121 ELAQQQNNKC INLLKAVPDA TINFDFAAMR LNITIPQITL LSSAHGYIPP EEWDEGIPAL 181 LLNYNFTGNR GNGNDSYFFS ELSGINIGPW RLRNNGSWNY FRGNGYHSEQ WNNIGTWVQR 241 AIIPLKSELV MGDGNTGSDI FDGVGFRGVR LYSSDNMYPD SQQGFAPTVR GIARTAAQLT 301 IRQNGFIIYQ SYVSPGAFEI TDLHPTSSNG DLDVTIDERD GNQQNYTIPY STVPILQREG 361 RFKFDLTAGD FRSGNSQQSS PFFFQGTALG GLPQEFTAYG GTQLSANYTA FLLGLGRNLG 421 NWGAVSLDVT HARSQLADDS RHEGDSIRFL YAKSMNTFGT NFQLMGYRYS TQGFYTLDDV 481 AYRRMEGYEY DYDYDGEHRD ELIIVNYHNL RFSRKDRLQL NISQSLNDFG SLYISGTHQK 541 YWNTSDSDTW YQVGYTSSWV GISYSLSFSW NESVGIPDNE RIVGLNVSVP FNVLTKRRYT 601 RENALDRAYA SFNANRNSNG QNSWLAGVGG TLLEGHNLSY HVSQGDTSNN GYTGSATANW 661 QATYGTLGVG YNYDRDQHDV NWQLSGGVVG HENGITLSQP LGDTNVLIKA PGAGGVRIEN 721 QTGILTDWRG YAVMPYATVY RYNRIALDTN TMGNSIDVEK NISSVVPTQG ALVRANFDTR 781 IGVRALITVT QGGKPVPFGS LVRENSIGIT SMWVMTGKFI //