LOCUS       BBK55617.1              2104 aa    PRT              BCT 04-APR-2020
DEFINITION  Escherichia coli O145:H28 DEAD/DEAH box helicase protein.
ACCESSION   AP019706-5118
PROTEIN_ID  BBK55617.1
SOURCE      Escherichia coli O145:H28
  ORGANISM  Escherichia coli O145:H28
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5488534)
  AUTHORS   Nakamura,K., Murase,K., Toyoda,A., Itoh,T., Yoshino,S., Lee,K.,
            Iyoda,S., Ohnishi,M., Ooka,T., Ogura,Y. and Hayashi,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2019) to the DDBJ/EMBL/GenBank databases.
            Contact:Keiji Nakamura
            Faculty of Medical Sciences, Kyushu University; Higashi-ku
            Maidashi 3-1-1, Fukuoka, Fukuoka 812-8582, Japan
REFERENCE   2
  AUTHORS   Nakamura,K., Murase,K., Sato,M.P., Toyoda,A., Itoh,T.,
            Mainil,J.G., Pierard,D., Yoshino,S., Kimata,K., Isobe,J., Seto,K.,
            Etoh,Y., Narimatsu,H., Saito,S., Yatsuyanagi,J., Lee,K., Iyoda,S.,
            Ohnishi,M., Ooka,T., Gotoh,Y., Ogura,Y. and Hayashi,T.
  TITLE     Differential dynamics and impacts of prophages and plasmids on the
            pangenome and virulence factor repertoires of Shiga
            toxin-producing Escherichia coli O145:H28
  JOURNAL   Microb Genom 6, e000323 (2020)
  REMARK    Publication Status: Online-Only
            DOI:10.1099/mgen.0.000323
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Canu v. 1.5
            Genome Coverage       :: 150x
            Sequencing Technology :: Illumina MiSeq; PacBio RS II
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2011"
                     /country="Japan:Fukushima"
                     /db_xref="taxon:1078034"
                     /isolation_source="human feces"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli O145:H28"
                     /serovar="O145:H28"
                     /strain="112648"
     protein         /inference="ab initio prediction:Prodigal:2.6"
                     /inference="similar to AA sequence:INSD:BAB38683.1"
                     /locus_tag="EC112648_5118"
                     /transl_table=11
BEGIN
        1 MDVQQLHYAP LLNQLHQRAV RSVVSQLALR SKSLTHYLES QYFQPPGQEG SLLADPVFES
       61 TFGWMPADET MEDLRDKLIS SPLVDALSKA PVPFRHQLTA WRTILEDKKS LLVSSGTGSG
      121 KTECFMVPVL EDLIRQQKST RQSLTGTQAI FLYPLNALIN SQQERLREWT RGFKGKIRFA
      181 LYNGETRHTK YEIQEDQLKV PEQALSREAI YEAPPSIMVT NTTMLEYMLI RRKDAPIIEK
      241 SQGMLKYIVL DEAHSYIGSQ AAELALLLRR VMQAFNVGPG TDKPVQIIAT SATIGEDSPE
      301 GNKELAKFVA DLAGVTERDV KVVRGYRQIP RVSESLIRHE YPTSLTSLKS LSPQDLYQQL
      361 CHYRVAQQLR QALTHPGRQA VRLSELLNVA RRTWPDINHR ELLQLLDLMA RSREGELAFT
      421 PLRMHGFIRT LAGLWACSNK QCSHKAHELN QSDWPFGQVW FEQRQYCDCG APVFEVLRCS
      481 GCGSAYLSAK EEMRGDGTNW LVAQPAAAEV DEFALDVDVY SEDEDNDELD NNSQFDRLIA
      541 SDGEKYIISL EETTAGKIDS EAQKHYEINL LRPESRGEGR NNSFACVCCG DTQRKNNPLF
      601 RPLRLGAPFF LNEIIPTLLE FSPLPQTREE QLGPFNGRRL LTFTDSRQGT ARISARLQQD
      661 ADKATLRALC YQELANITEP SAKLSPAHCA LLEKVISQFS VLPLKNSIDA LKKAMAANEE
      721 LSPTDIQALK IIEPMVSSLS TEHAEAMQIL QANSGNQQKK TMSWQTLSEQ LVGSVDLADR
      781 MRGSFKELSG LDLTKQQFAD FCLYSEFGRR PKNAWTLESL GLVAIHYPFI DKVTTCPQDW
      841 KTLLPDPDKQ LAEWRNLLKI TLDFFIRENS AVFYENEQYP RWMGARFPVK MLQGPDKKNK
      901 GQKRDQLWPQ IRDRHYNRVI KLLIAVFPAI QPEQAHWKSL VNHLMIEVWD AIRPCLRQFE
      961 SGYQLDIKQQ AEFYSPKQVW RCPYTRRALD VTLLGYSPYL PGSKEIAPEK AVLIEMPELP
     1021 VRHWRLSGGG EIAREERLEW LESNALIQHA REEGLWSTRS DRLALKDSWY RLEEHSAQRT
     1081 PEQNQFNEKQ FKSGKVNVLN CSTTMEMGVD IGGMSLVAMN NVPPAPANYL QRAGRAGRRG
     1141 ESASAAITLC KNTAHGMEVF KAPLWAFNTT ASAPRVRFGS SSIVQRHVNA QVLGLFLRAE
     1201 VPDATKLSCK WFFEGDESQC LRFLHWLNHQ ADELADKLKR LTQGTVLMSL TATQLLTRTQ
     1261 AMMQQVDIRW RSQLAILLEN IEALKADNSA WEETPAGKAI AYQLRDYRGA YLFSKLISEA
     1321 FLPGHGFPVG VVNFNYLTAD ELEKRRAIKA TQADPNEGGE SFSRRIEKLP SRDLPTALRE
     1381 YAPGADVVLG GKVYRSSGIM LGKVLASGQE LSGDHHIPWF WHCRKCGAGA TSTTHPVECS
     1441 HCKADIQQLD VKRYLQPVGF ATDIRYQAHN DVSMPAQLPW KDPRVLVPSS VWVSLPDAGL
     1501 GRYRFSHSGE LFHFSEGEFG HGYAICLSCG RAESQTQPQR TPENLKNPER ENTHYLLRGG
     1561 SNDRQGSNKL CHGHVHKDLW LGYSSRTDMV ELQLNDDNGL LIRDEVAARS LAVALREGLA
     1621 HKLGIENTEL GVTTQQARDI NGYTGYSIFI YDNNAGGAGY AVQLIDHWAD VFNYARKLLD
     1681 CSCDKFCHHC LLSYDSQHYV NRLDRHHALT LLTNVRLQRL NLAPEYQYFG DGSRVETNPL
     1741 SLRIAQCLNS EIYDSCSLVL AGPQEQWDFA QWPLFKELLQ FASSGGNVEL LVATPLENLT
     1801 DSSRHQLSAL AAMPGGRLQV KSIATAQLMQ GKGRWLAQVT RKGQSQQWAA DDSATVAPGE
     1861 LWGQSASSPV VTLKGTSGKT FSGQTLSAED LLPALPTGAV RINLCEQLDG PLEGFGSRFW
     1921 SLVTQQHAGW KQAFTRHKEI THVEYSDRYL NSPFTARLLG EILTELVEQG MAERASLTVC
     1981 VKKLDYNSRQ HDALYNAWLN EEDRQQVVTT LLEEGYLGPA WPGAISWLTG DNQSTEHGRE
     2041 LTVTFSDGSQ HYVLLDMGLS YWRCIEDTFF DFALRVPQQV ERLANTRARA VAPGNDLRSY
     2101 IIAG
//