LOCUS       BBK55527.1               813 aa    PRT              BCT 04-APR-2020
DEFINITION  Escherichia coli O145:H28 exoribonuclease R protein.
ACCESSION   AP019706-5027
PROTEIN_ID  BBK55527.1
SOURCE      Escherichia coli O145:H28
  ORGANISM  Escherichia coli O145:H28
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5488534)
  AUTHORS   Nakamura,K., Murase,K., Toyoda,A., Itoh,T., Yoshino,S., Lee,K.,
            Iyoda,S., Ohnishi,M., Ooka,T., Ogura,Y. and Hayashi,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2019) to the DDBJ/EMBL/GenBank databases.
            Contact:Keiji Nakamura
            Faculty of Medical Sciences, Kyushu University; Higashi-ku
            Maidashi 3-1-1, Fukuoka, Fukuoka 812-8582, Japan
REFERENCE   2
  AUTHORS   Nakamura,K., Murase,K., Sato,M.P., Toyoda,A., Itoh,T.,
            Mainil,J.G., Pierard,D., Yoshino,S., Kimata,K., Isobe,J., Seto,K.,
            Etoh,Y., Narimatsu,H., Saito,S., Yatsuyanagi,J., Lee,K., Iyoda,S.,
            Ohnishi,M., Ooka,T., Gotoh,Y., Ogura,Y. and Hayashi,T.
  TITLE     Differential dynamics and impacts of prophages and plasmids on the
            pangenome and virulence factor repertoires of Shiga
            toxin-producing Escherichia coli O145:H28
  JOURNAL   Microb Genom 6, e000323 (2020)
  REMARK    Publication Status: Online-Only
            DOI:10.1099/mgen.0.000323
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Canu v. 1.5
            Genome Coverage       :: 150x
            Sequencing Technology :: Illumina MiSeq; PacBio RS II
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2011"
                     /country="Japan:Fukushima"
                     /db_xref="taxon:1078034"
                     /isolation_source="human feces"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli O145:H28"
                     /serovar="O145:H28"
                     /strain="112648"
     protein         /EC_number="3.1.-.-"
                     /gene="rnr"
                     /inference="ab initio prediction:Prodigal:2.6"
                     /inference="similar to AA sequence:INSD:AAN45751.1"
                     /locus_tag="EC112648_5027"
                     /transl_table=11
BEGIN
        1 MSQDPFQERE AEKYANPIPS REFILEHLTK REKPASRDEL AVELHIEGEE QLEGLRRRLR
       61 AMERDGQLVF TRRQCYALPE RLDLVKGTVI GHRDGYGFLR VEGRKDDLYL SSEQMKTCIH
      121 GDQVLAQPLG ADRKGRREAR IVRVLVPKTS QIVGRYFTEA GVGFVVPDDS RLSFDILIPP
      181 DQIMGARMGF VVVVELTQRP TRRTKAVGKI VEVLGDNMGT GMAVDIALRT HEIPYIWPQA
      241 VEQQVAGLKE EVPEEAKAGR VDLRDLPLVT IDGEDARDFD DAVYCEKKRG GGWRLWVAIA
      301 DVSYYVRPPT PLDREARNRG TSVYFPSQVI PMLPEVLSNG LCSLNPQVDR LCMVCEMTVS
      361 SKGRLTGYKF YEAVMSSHAR LTYTKVWHIL QGDQDLREQY APLVKHLEEL HNLYKVLDKA
      421 REERGGISFE SEEAKFIFNA ERRIERIEQT QRNDAHKLIE ECMILANISA ARFVEKAKEP
      481 ALFRIHDKPS TEAITSFRSV LAELGLELPG GNKPEPRDYA ELLESVADRP DAEMLQTMLL
      541 RSMKQAIYDP ENRGHFGLAL QSYAHFTSPI RRYPDLTLHR AIKYLLAKEQ GHQGNTTETG
      601 GYHYSMEEML QLGQHCSMAE RRADEATRDV ADWLKCDFML DQVGNVFKGV ISSVTGFGFF
      661 VRLDDLFIDG LVHVSSLDND YYRFDQVGQR LMGESSGQTY RLGDRVEVRV EAVNMDERKI
      721 DFSLISSERA PRNVGKTARE KAKKGDAGKK GGKRRQVGKK VNFEPDSAFR GEKKTKPKAA
      781 KKDARKAKKP SAKTQKIAAA TKAKRAAKKK VAE
//