LOCUS BBK54747.1 660 aa PRT BCT 04-APR-2020 DEFINITION Escherichia coli O145:H28 ligand-gated channel protein protein. ACCESSION AP019706-4234 PROTEIN_ID BBK54747.1 SOURCE Escherichia coli O145:H28 ORGANISM Escherichia coli O145:H28 Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5488534) AUTHORS Nakamura,K., Murase,K., Toyoda,A., Itoh,T., Yoshino,S., Lee,K., Iyoda,S., Ohnishi,M., Ooka,T., Ogura,Y. and Hayashi,T. TITLE Direct Submission JOURNAL Submitted (04-JUN-2019) to the DDBJ/EMBL/GenBank databases. Contact:Keiji Nakamura Faculty of Medical Sciences, Kyushu University; Higashi-ku Maidashi 3-1-1, Fukuoka, Fukuoka 812-8582, Japan REFERENCE 2 AUTHORS Nakamura,K., Murase,K., Sato,M.P., Toyoda,A., Itoh,T., Mainil,J.G., Pierard,D., Yoshino,S., Kimata,K., Isobe,J., Seto,K., Etoh,Y., Narimatsu,H., Saito,S., Yatsuyanagi,J., Lee,K., Iyoda,S., Ohnishi,M., Ooka,T., Gotoh,Y., Ogura,Y. and Hayashi,T. TITLE Differential dynamics and impacts of prophages and plasmids on the pangenome and virulence factor repertoires of Shiga toxin-producing Escherichia coli O145:H28 JOURNAL Microb Genom 6, e000323 (2020) REMARK Publication Status: Online-Only DOI:10.1099/mgen.0.000323 COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.5 Genome Coverage :: 150x Sequencing Technology :: Illumina MiSeq; PacBio RS II ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2011" /country="Japan:Fukushima" /db_xref="taxon:1078034" /isolation_source="human feces" /mol_type="genomic DNA" /organism="Escherichia coli O145:H28" /serovar="O145:H28" /strain="112648" protein /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:BAB37803.1" /locus_tag="EC112648_4234" /transl_table=11 BEGIN 1 MSRPQFTSLR LSLLALAVSA TLPTFAFATE TMTVTATGNA RSSFEAPMMV SVIDTSAPEN 61 QTATSATDLL RHVPGITLDG TGRTNGQDVN MRGYDHRGVL VLVDGIRQGT DTGHLNGTFL 121 DPALIKRVEI VRGPSALLYG SGALGGVISY DTVDAKDLLQ EGQSSGFRVF GTGGTGDHSL 181 GLGASAFGRT ENLDGIVAWS SRDRGDLRQS NGETAPNDES INNMLAKGTW QIDSAQSLSG 241 LVRYYNNDAR EPKNPQTVEA SESSNPMVDR STIQRDAQLS YKLAPQGNDW LNADAKIYWS 301 EVRINAQNTE SSGEYREQIT KGARLENRST LFADSFASHL LTYGGEYYRQ EQHPGGATTG 361 FPQAKIDFSS GWLQDEITLR DLPITLLGGT RYDSYRGSSD GYKDVDADKW SSRAGMTINP 421 TNWLMLFGSY AQAFRAPTMG EMYNDSKHFS IGRFYTNYWV PNPNLRPETN ETQEYGFGLR 481 FDDLMLSNDA LEFKASYFDT KAKDYISTTV DFAAATTMSY NVPNAKIWGW DVMTKYTTDL 541 FSLDVAYNRT RGKDTDTGEY ISSINPDTVT STLNIPIAHS GFSVGWVGTF ADRSTHISSS 601 YSKQPGYGVN DFYVSYQGQQ ALKGMTTTLV LGNAFDKEYW SPQGIPQDGR NGKIFVSYQW //