LOCUS BBK53231.1 619 aa PRT BCT 04-APR-2020 DEFINITION Escherichia coli O145:H28 putative type VI-related protein protein. ACCESSION AP019706-2673 PROTEIN_ID BBK53231.1 SOURCE Escherichia coli O145:H28 ORGANISM Escherichia coli O145:H28 Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5488534) AUTHORS Nakamura,K., Murase,K., Toyoda,A., Itoh,T., Yoshino,S., Lee,K., Iyoda,S., Ohnishi,M., Ooka,T., Ogura,Y. and Hayashi,T. TITLE Direct Submission JOURNAL Submitted (04-JUN-2019) to the DDBJ/EMBL/GenBank databases. Contact:Keiji Nakamura Faculty of Medical Sciences, Kyushu University; Higashi-ku Maidashi 3-1-1, Fukuoka, Fukuoka 812-8582, Japan REFERENCE 2 AUTHORS Nakamura,K., Murase,K., Sato,M.P., Toyoda,A., Itoh,T., Mainil,J.G., Pierard,D., Yoshino,S., Kimata,K., Isobe,J., Seto,K., Etoh,Y., Narimatsu,H., Saito,S., Yatsuyanagi,J., Lee,K., Iyoda,S., Ohnishi,M., Ooka,T., Gotoh,Y., Ogura,Y. and Hayashi,T. TITLE Differential dynamics and impacts of prophages and plasmids on the pangenome and virulence factor repertoires of Shiga toxin-producing Escherichia coli O145:H28 JOURNAL Microb Genom 6, e000323 (2020) REMARK Publication Status: Online-Only DOI:10.1099/mgen.0.000323 COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.5 Genome Coverage :: 150x Sequencing Technology :: Illumina MiSeq; PacBio RS II ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2011" /country="Japan:Fukushima" /db_xref="taxon:1078034" /isolation_source="human feces" /mol_type="genomic DNA" /organism="Escherichia coli O145:H28" /serovar="O145:H28" /strain="112648" protein /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:AHG09282.1" /locus_tag="EC112648_2672" /note="EC112648_IE03" /transl_table=11 BEGIN 1 MTSGEDYYRE ELDYIRRYAR LLARENPDLK NFLGDKDVDP DTERLMGTFA FLSGRLREKI 61 EDRFPEITVP LIKRLCPSYL RTVPPMTIIE YTPDNTLATV YDIPRDAQVM NAPHRDSHPE 121 ESYLIPGAQD DLPEEEEPPC IFTLCRNIRL LPLHIHNVNN CSTPDQGIID IIFAPLPGSR 181 ITAADLKGIS LWLGDENIIS RWQVYLWLCR YRRGAELITG GRRYPQPGLT IKPSGFSHDE 241 SLLPQPGSLH SGYRIIQDWF CFPDAFFFFD LSGISLPGEI ISRPFTLRLR FDRPLPETVN 301 LSRQSLRLHC TPAVNLFFHD AVPVTPDNPH QEYPLQASQF WPGYFDIFRV DSVQGQEHNT 361 FRDDDLVALS RHGNQRKWLS SDSPLRPMEY HQERRIIYWK HSVRRSLLSV NPAHFISFRH 421 ADNSVPDATL TGRDPIQISL ICTNGDQPCR LAPGDICVPV GQDASVAPFR NVTTPTPPLP 481 PVPDGPRHWS LLNTMTLNYL TMNDVEVLRD ILRTFDRCGI HTPFCARLSP EKLNALEKLE 541 TRPTDRVFRD IVVRGLSSTL YVNPQPFACE GEMYHLGTVL SHFFALYASV NSWHMLTMIN 601 TQTEEVWRWT ERTGQFPAM //