LOCUS BBK52305.1 457 aa PRT BCT 04-APR-2020 DEFINITION Escherichia coli O145:H28 outer membrane channel protein protein. ACCESSION AP019706-1717 PROTEIN_ID BBK52305.1 SOURCE Escherichia coli O145:H28 ORGANISM Escherichia coli O145:H28 Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5488534) AUTHORS Nakamura,K., Murase,K., Toyoda,A., Itoh,T., Yoshino,S., Lee,K., Iyoda,S., Ohnishi,M., Ooka,T., Ogura,Y. and Hayashi,T. TITLE Direct Submission JOURNAL Submitted (04-JUN-2019) to the DDBJ/EMBL/GenBank databases. Contact:Keiji Nakamura Faculty of Medical Sciences, Kyushu University; Higashi-ku Maidashi 3-1-1, Fukuoka, Fukuoka 812-8582, Japan REFERENCE 2 AUTHORS Nakamura,K., Murase,K., Sato,M.P., Toyoda,A., Itoh,T., Mainil,J.G., Pierard,D., Yoshino,S., Kimata,K., Isobe,J., Seto,K., Etoh,Y., Narimatsu,H., Saito,S., Yatsuyanagi,J., Lee,K., Iyoda,S., Ohnishi,M., Ooka,T., Gotoh,Y., Ogura,Y. and Hayashi,T. TITLE Differential dynamics and impacts of prophages and plasmids on the pangenome and virulence factor repertoires of Shiga toxin-producing Escherichia coli O145:H28 JOURNAL Microb Genom 6, e000323 (2020) REMARK Publication Status: Online-Only DOI:10.1099/mgen.0.000323 COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.5 Genome Coverage :: 150x Sequencing Technology :: Illumina MiSeq; PacBio RS II ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2011" /country="Japan:Fukushima" /db_xref="taxon:1078034" /isolation_source="human feces" /mol_type="genomic DNA" /organism="Escherichia coli O145:H28" /serovar="O145:H28" /strain="112648" protein /gene="eefC" /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:AAN80231.1" /locus_tag="EC112648_1717" /transl_table=11 BEGIN 1 MLRRSLIFLV LLSAGCVSLD PHYSTPESPI PATLPGAQGQ GKAISHDWQQ VIHDPRLQQV 61 VTIALNSNRD VQKAIADIDS ARALYGQTNA SLFPTVNAAL SSTRSRSLAN GTETTAEADG 121 TVSSFTLDLF GRNQSLSRAA RETWLASEFT AQNTRLTLIA EISTAWLTLA ADNSNLALAK 181 ETMTSAENSL KIIQRQQQVG TAAATDVSEA MSVYQQARAS VASYQTQVMQ DKNALNLLAG 241 TTLEENLLPG TLESLPEQMI SLVPAGVSSD VLLRRPDIQE AEHNLKSANA DIGAARANFF 301 PTISLTASAG VGSDALSSLF SHGMQIWSFT PSVTLPLFTG GSNLAQLRYA EAQKRGLIAT 361 YEKTVQSAFK DVANALARRT TLEEQLDAQR QYVKAEQQTV DVGLRRYQTG VGDYLTVLTA 421 QRSLWSAQQE LLALQLTDFT NRITLWQSLG GGMSSLK //