LOCUS BBK45914.1 623 aa PRT BCT 04-APR-2020 DEFINITION Escherichia coli O145:H28 peptidyl-prolyl cis-trans isomerase D protein. ACCESSION AP019703-417 PROTEIN_ID BBK45914.1 SOURCE Escherichia coli O145:H28 ORGANISM Escherichia coli O145:H28 Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5374674) AUTHORS Nakamura,K., Murase,K., Toyoda,A., Itoh,T., Yoshino,S., Lee,K., Iyoda,S., Ohnishi,M., Ooka,T., Ogura,Y. and Hayashi,T. TITLE Direct Submission JOURNAL Submitted (04-JUN-2019) to the DDBJ/EMBL/GenBank databases. Contact:Keiji Nakamura Faculty of Medical Sciences, Kyushu University; Higashi-ku Maidashi 3-1-1, Fukuoka, Fukuoka 812-8582, Japan REFERENCE 2 AUTHORS Nakamura,K., Murase,K., Sato,M.P., Toyoda,A., Itoh,T., Mainil,J.G., Pierard,D., Yoshino,S., Kimata,K., Isobe,J., Seto,K., Etoh,Y., Narimatsu,H., Saito,S., Yatsuyanagi,J., Lee,K., Iyoda,S., Ohnishi,M., Ooka,T., Gotoh,Y., Ogura,Y. and Hayashi,T. TITLE Differential dynamics and impacts of prophages and plasmids on the pangenome and virulence factor repertoires of Shiga toxin-producing Escherichia coli O145:H28 JOURNAL Microb Genom 6, e000323 (2020) REMARK Publication Status: Online-Only DOI:10.1099/mgen.0.000323 COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.9 Genome Coverage :: 63x Sequencing Technology :: 454 GS FLX; Illumina MiSeq; ABI 3730 ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2011" /country="Japan:Miyazaki" /db_xref="taxon:1078034" /isolation_source="human feces" /mol_type="genomic DNA" /organism="Escherichia coli O145:H28" /serovar="O145:H28" /strain="10942" protein /EC_number="5.2.1.8" /gene="ppiD" /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:AAC73544.1" /locus_tag="EC10942_0417" /transl_table=11 BEGIN 1 MMDSLRTAAN SLVLKIIFGI IIVSFILTGV SGYLIGGGNN YAAKVNDQEI SRGQFENAFN 61 SERNRMQQQL GDQYSELAAN EGYMKTLRQQ VLNRLIDEAL LDQYARELKL GISDEQVKQA 121 IFATPAFQVD GKFDNSRYNG ILNQMGMTAD QYAQALRNQL TTQQLINGVA GTDFMLKGET 181 DELAALVAQQ RVVREATIDV NALAAKQPVT EQEIASYYEQ NKNNFMTPEQ FRVSYIKLDA 241 ATMQQPVSDA DIQSYYDQHQ DQFTQPQRTR YSIIQTKTED EAKAVLDELN KGGDFAALAK 301 EKSADIISAR NGGDMGWLED ATIPDELKNA GLKEKGQLSG VIKSSVGFLI VRLDDIQPAK 361 VKSLDEVRDD IAAKVKHEKA LDAYYALQQK VSDAASNDTE SLAGAEQAAG VKATQTGWFS 421 KDNLPEELNF KPVADAIFNG GLVGENGAPG INSDIITVDG DRAFVLRISE HKPEAVKPLA 481 DVQEQVKALV QHNKAEQQAK VDAEKLLVDL KAGKGAEAMQ AAGLKFGEPK TLSRSGRDPI 541 SQAAFALPLP AKDKPSYGMA TDMQGNVVLL ALDEVKQGSM PEDQKKAMVQ GITQNNAQIV 601 FEALMSNLRK EAKIKIGDAL EQQ //