LOCUS       BBI26120.1               444 aa    PRT              BCT 20-JUN-2019
DEFINITION  Enterococcus faecium RNA polymerase sigma-54 factor protein.
ACCESSION   AP019394-701
PROTEIN_ID  BBI26120.1
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae;
            Enterococcus.
REFERENCE   1  (bases 1 to 2535796)
  AUTHORS   Kanesaki,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2019) to the DDBJ/EMBL/GenBank databases.
            Contact:Yu Kanesaki
            Tokyo University of Agriculture, NODAI Genome Research Center;
            Sakuragaoka 1-1-1, Setagaya, Tokyo 156-8502, Japan
REFERENCE   2
  AUTHORS   Abe,K., Kanesaki,Y., Abdel-Rahman,M.A., Watanabe,S., Zendo,T.,
            Chibazakura,T., Shimizu-Kadota,M., Sonomoto,K. and Yoshikawa,H.
  TITLE     Complete Genome Sequence of Enterococcus faecium QU50, a
            Thermophilic Lactic Acid Bacterium Capable of Metabolizing Xylose
  JOURNAL   Microbiol Resour Announc 8, e00413-19 (2019)
  REMARK    Publication Status: Online-Only
            DOI:10.1128/MRA.00413-19
REFERENCE   3
  AUTHORS   Abdel-Rahman,M.A., Tashiro,Y., Zendo,T., Sakai,K. and Sonomoto,K.
  TITLE     Enterococcus faecium QU 50: a novel thermophilic lactic acid
            bacterium for high-yield l-lactic acid production from xylose.
  JOURNAL   FEMS Microbiol. Lett. 8, 15-20 (2015)
COMMENT     Annotated using prokka 1.11 from http://www.vicbioinformatics.com.
            Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: RS_HGAP Asembly v. 2; CLC Genomics
                                     workbench v. 7.5
            Genome Coverage       :: 192x
            Sequencing Technology :: PacBio RSII, Illumina MiSeq
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2013-10-25"
                     /country="Egypt: Kafr-El-Sheik governorate"
                     /db_xref="taxon:1352"
                     /isolation_source="Eutrophic soil"
                     /mol_type="genomic DNA"
                     /organism="Enterococcus faecium"
                     /strain="QU 50"
     protein         /gene="rpoN"
                     /inference="ab initio prediction:Prodigal:2.6"
                     /inference="similar to AA sequence:INSD:BAK95104.1"
                     /locus_tag="EFQU50X_00706"
                     /transl_table=11
BEGIN
        1 MKFEQNFSQK QQQTQKLAMT QQLQQSIQVL QYNSEELLAF VENQAMENPL VEVVEPEWQP
       61 DYIKASSSSY EGEETNYLNQ IPDTKGSLFD SLIEQVHLNY RDTFLRKIVL YLVEYIDLNG
      121 FLTISLEEAG KEIGATPIQM LDALTLIQQL EPAGVGARSL QECLMLQTER DDYAPELAYI
      181 VLEECFEELV ERKWKEIAQR FSVDLHAVQQ IFDYLQTLSP SPGRIFDRSS ELYIIPDVRV
      241 LVDDDKNVQV ISNRKNQPNI RFQESYFKQM SQQADKETEN YLKERKQEFE WLKKTILQRG
      301 DTILRVAQVI VSRQKAFFID KERPIKPLTL KEVATEIDVH ESTVSRAVNG KYLETDFGVF
      361 ELKKFFTTRI PTNSTEQTED LSADTAKKKL QELVDQEDKN KPLSDQKLVE LLKKDEIAIS
      421 RRTVAKYRDL LGIPSSSKRK RYDN
//