LOCUS BBG79944.1 1407 aa PRT BCT 16-APR-2019
DEFINITION Escherichia coli RNA polymerase beta prime subunit protein.
ACCESSION AP019189-4146
PROTEIN_ID BBG79944.1
SOURCE Escherichia coli
ORGANISM Escherichia coli
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
Enterobacteriaceae; Escherichia.
REFERENCE 1 (bases 1 to 4825589)
AUTHORS Sugawara,Y., Akeda,Y., Sakamoto,N., Takeuchi,D. and Hamada,S.
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2018) to the DDBJ/EMBL/GenBank databases.
Contact:Yo Sugawara
Osaka University, Research Institute for Microbial Diseases; 3-1
Yamadaoka, Suita, Osaka 565-0871, Japan
REFERENCE 2
AUTHORS Sugawara,Y., Akeda,Y., Hagiya,H., Sakamoto,N., Takeuchi,D.,
Shanmugakani,R.K., Motooka,D., Nishi,I., Zin,K.N., Aye,M.M.,
Myint,T., Tomono,K. and Hamada,S.
TITLE Spreading Patterns of NDM-Producing Enterobacteriaceae in Clinical
and Environmental Settings in Yangon, Myanmar
JOURNAL Antimicrob. Agents Chemother. 63, e01924-18 (2019)
REMARK DOI:10.1128/AAC.01924-18
REFERENCE 3
AUTHORS Sugawara,Y., Akeda,Y., Sakamoto,N., Takeuchi,D., Motooka,D.,
Nakamura,S., Hagiya,H., Yamamoto,N., Nishi,I., Yoshida,H.,
Okada,K., Zin,K.N., Aye,M.M., Tomono,K. and Hamada,S.
TITLE Genetic characterization of blaNDM plasmids in
carbapenem-resistant Escherichia coli isolated in Myanmar
JOURNAL PLoS ONE 12, e184720 (2017)
REMARK Publication Status: Online-Only
DOI:10.1371/journal.pone.0184720
COMMENT Annotated at DFAST https://dfast.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: PacBio Hierarchical Genome Assembly
Process v. 3
Genome Coverage :: 163.8x
Sequencing Technology :: PacBio RSII
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /db_xref="taxon:562"
/mol_type="genomic DNA"
/organism="Escherichia coli"
/strain="M217"
protein /gene="rpoC"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:INSD:AAC76962.1"
/locus_tag="MYEC217_41460"
/transl_table=11
BEGIN
1 MKDLLKFLKA QTKTEEFDAI KIALASPDMI RSWSFGEVKK PETINYRTFK PERDGLFCAR
61 IFGPVKDYEC LCGKYKRLKH RGVICEKCGV EVTQTKVRRE RMGHIELASP TAHIWFLKSL
121 PSRIGLLLDM PLRDIERVLY FESYVVIEGG MTNLERQQIL TEEQYLDALE EFGDEFDAKM
181 GAEAIQALLK SMDLEQECEQ LREELNETNS ETKRKKLTKR IKLLEAFVQS GNKPEWMILT
241 VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLAAPDI IVRNEKRMLQ
301 EAVDALLDNG RRGRAITSSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPY
361 LRLHQCGLPK KMALELFKPF IYGKLELRGL ATTIKAAKKM VEREEAVVWD ILDEVIREHP
421 VLLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTLEAQLEA
481 RALMMSTNNI LSPANGEPII VPSQDVVLGL YYMTRDCVNA KGEGMVLTGP KEAERLYRSG
541 LASLHARVKV RITEYEKDAN GELVAKTSLK DTTVGRAILW MIVPKGLPYS IVNQALGKKA
601 ISKMLNTCYR ILGLKPTVIF ADQIMYTGFA YAARSGASVG IDDMVIPEKK HEIISEAEAE
661 VAEIQEQFQS GLVTAGERYN KVIDIWAAAN DRVSKAMMDN LQTETVINRD GQEEKQVSFN
721 SIYMMADSGA RGSAAQIRQL AGMRGLMAKP DGSIIETPIT ANFREGLNVL QYFISTHGAR
781 KGLADTALKT ANSGYLTRRL VDVAQDLVVT EDDCGTHEGI MMTPVIEGGD VKEPLRDRVL
841 GRVTAEDVLK PGTADILVPR NTLLHEQWCD LLEENSVDAV KVRSVVSCDT DFGVCAHCYG
901 RDLARGHIIN KGEAIGVIAA QSIGEPGTQL TMRTFHIGGA ASRAAAESSI QVKNKGSIKL
961 SNVKSVVNSS GKLVITSRNT ELKLIDEFGR TKESYKVPYG AVLAKGDGEQ VAGGETVANW
1021 DPHTMPVITE VSGFVRFTDM IDGQTITRQT DELTGLSSLV VLDSAERTAG GKDLRPALKI
1081 VDAQGNDVLI PGTDMPAQYF LPGKAIVQLE DGVQISSGDT LARIPQESGG TKDITGGLPR
1141 VADLFEARRP KEPAILAEIS GIVSFGKETK GKRRLVITPV DGSDPYEEMI PKWRQLNVFE
1201 GERVERGDVI SDGPEAPHDI LRLRGVHAVT RYIVNEVQDV YRLQGVKIND KHIEVIVRQM
1261 LRKATIVNAG SSDFLEGEQV EYSRVKIANR ELEANGKVGA TYSRDLLGIT KASLATESFI
1321 SAASFQETTR VLTEAAVAGK RDELRGLKEN VIVGRLIPAG TGYAYHQDRM RRRAAGEAPA
1381 APQVTAEDAS ASLAELLNAG LGGSDNE
//