LOCUS BBF62011.1 840 aa PRT BCT 27-JUL-2018 DEFINITION Escherichia coli outer membrane usher protein FimD protein. ACCESSION AP018808-4825 PROTEIN_ID BBF62011.1 SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5678205) AUTHORS Kusumoto,M. and Akiba,M. TITLE Direct Submission JOURNAL Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases. Contact:Masahiro Kusumoto National Institute of Animal Health; Chuzan 2702, Kagoshima, Kagoshima 891-0105, Japan REFERENCE 2 AUTHORS Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M. TITLE Genomic analysis of colistin resistant EHEC isolated from cattle in Japan. JOURNAL Unpublished (2018) COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP Assembly v. 3.0 Genome Coverage :: 161x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2014" /country="Japan" /db_xref="taxon:562" /host="Bos taurus" /isolation_source="feces" /mol_type="genomic DNA" /organism="Escherichia coli" /strain="E2865" protein /gene="fimD_5" /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:CBG36907.1" /locus_tag="E2865_04930" /transl_table=11 BEGIN 1 MMTTRIVVGL TAGTCLIFSQ NLMAEVSVFN PALLEIDHQS GVDIRQFNRA NLMPPGVYSV 61 DIFINGKMFE RQDVTFVQDN PDADLHACFI AIKKTLSSFG IKVDALKSFN DVDETVCLDP 121 APRIEGSSWQ FDSDKLQLNI SIPQIYMDAM AYDYISPTRW DEGINALTIN YDFSGSHTLR 181 SDYGSQETDT SYLNLRNGLN IGPWRLRNYS TLNTSDGRAE YNSISTWIQR DIAALRSQIM 241 IGDTWTASDI FDSTQIRGAR LYTDNDMLPA SQNGFAPVVR GIAKSNATVI IRQNGYVIYQ 301 SAVPQGAFEI TDLNTASTGG DLDVTIKEED GSEQRFTQPY ASLAILKREG QTDVDVSVGE 361 LRDEDGFTPD VLQAQILHGF SHGITLYGGM QAAENYGSAA LGVGKDLGAL GAISFDVTHA 421 RANFSHDDTE TGQSYRFLYS KRFDDTDTSL RLVGYRYSTE GYYTLNEWAS RRNSPEDFWE 481 TGNRRSRVEG TLTQSLGRDY GNLYLTLSRQ QYWHTDDVER LMQFGYSSSW KRLSWNVSWS 541 YSNTARQGTG NNHASDNTSE QIYMLSLSVP LSGWWGNSYA TYSVSQNDNS GSSHQLGLSG 601 TALERNNLSW NLMQSYNSHD DEVGGNMSLT YDGSYGTVNG SYNYSQNSQR LNYGIRGGIL 661 AHSEGVTLSQ ELGETIALVK APGAAGLEID NMRGAATDWR GYTVKTQLNP YDENRVAISD 721 NYFSKSNIEL DNTVVTMVST RGAVVKAEFV THVGYRVLFR VLNANGKPVP FGAIAAIQDA 781 SLADSGIVGD RGELYLSGLP EKGQVTLSWG ENASTKCIFN YSLSTPESES GLIEQGVTCH //