LOCUS       BBF62011.1               840 aa    PRT              BCT 27-JUL-2018
DEFINITION  Escherichia coli outer membrane usher protein FimD protein.
ACCESSION   AP018808-4825
PROTEIN_ID  BBF62011.1
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5678205)
  AUTHORS   Kusumoto,M. and Akiba,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases.
            Contact:Masahiro Kusumoto
            National Institute of Animal Health; Chuzan 2702, Kagoshima,
            Kagoshima 891-0105, Japan
REFERENCE   2
  AUTHORS   Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M.
  TITLE     Genomic analysis of colistin resistant EHEC isolated from cattle
            in Japan.
  JOURNAL   Unpublished (2018)
COMMENT     Annotated using prokka 1.11 from http://www.vicbioinformatics.com.
            Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: RS HGAP Assembly v. 3.0
            Genome Coverage       :: 161x
            Sequencing Technology :: PacBio RSII
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2014"
                     /country="Japan"
                     /db_xref="taxon:562"
                     /host="Bos taurus"
                     /isolation_source="feces"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli"
                     /strain="E2865"
     protein         /gene="fimD_5"
                     /inference="ab initio prediction:Prodigal:2.6"
                     /inference="similar to AA sequence:INSD:CBG36907.1"
                     /locus_tag="E2865_04930"
                     /transl_table=11
BEGIN
        1 MMTTRIVVGL TAGTCLIFSQ NLMAEVSVFN PALLEIDHQS GVDIRQFNRA NLMPPGVYSV
       61 DIFINGKMFE RQDVTFVQDN PDADLHACFI AIKKTLSSFG IKVDALKSFN DVDETVCLDP
      121 APRIEGSSWQ FDSDKLQLNI SIPQIYMDAM AYDYISPTRW DEGINALTIN YDFSGSHTLR
      181 SDYGSQETDT SYLNLRNGLN IGPWRLRNYS TLNTSDGRAE YNSISTWIQR DIAALRSQIM
      241 IGDTWTASDI FDSTQIRGAR LYTDNDMLPA SQNGFAPVVR GIAKSNATVI IRQNGYVIYQ
      301 SAVPQGAFEI TDLNTASTGG DLDVTIKEED GSEQRFTQPY ASLAILKREG QTDVDVSVGE
      361 LRDEDGFTPD VLQAQILHGF SHGITLYGGM QAAENYGSAA LGVGKDLGAL GAISFDVTHA
      421 RANFSHDDTE TGQSYRFLYS KRFDDTDTSL RLVGYRYSTE GYYTLNEWAS RRNSPEDFWE
      481 TGNRRSRVEG TLTQSLGRDY GNLYLTLSRQ QYWHTDDVER LMQFGYSSSW KRLSWNVSWS
      541 YSNTARQGTG NNHASDNTSE QIYMLSLSVP LSGWWGNSYA TYSVSQNDNS GSSHQLGLSG
      601 TALERNNLSW NLMQSYNSHD DEVGGNMSLT YDGSYGTVNG SYNYSQNSQR LNYGIRGGIL
      661 AHSEGVTLSQ ELGETIALVK APGAAGLEID NMRGAATDWR GYTVKTQLNP YDENRVAISD
      721 NYFSKSNIEL DNTVVTMVST RGAVVKAEFV THVGYRVLFR VLNANGKPVP FGAIAAIQDA
      781 SLADSGIVGD RGELYLSGLP EKGQVTLSWG ENASTKCIFN YSLSTPESES GLIEQGVTCH
//