LOCUS BBF56582.1 917 aa PRT BCT 27-JUL-2018 DEFINITION Escherichia coli outer membrane usher protein FimD protein. ACCESSION AP018802-5050 PROTEIN_ID BBF56582.1 SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5357442) AUTHORS Kusumoto,M. and Akiba,M. TITLE Direct Submission JOURNAL Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases. Contact:Masahiro Kusumoto National Institute of Animal Health; Chuzan 2702, Kagoshima, Kagoshima 891-0105, Japan REFERENCE 2 AUTHORS Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M. TITLE Genomic analysis of colistin resistant EHEC isolated from cattle in Japan. JOURNAL Unpublished (2018) COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP Assembly v. 3.0 Genome Coverage :: 176x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2013" /country="Japan" /db_xref="taxon:562" /host="Bos taurus" /isolation_source="feces" /mol_type="genomic DNA" /organism="Escherichia coli" /strain="E2863" protein /gene="fimD_8" /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:BAI38888.1" /locus_tag="E2863_05174" /transl_table=11 BEGIN 1 MSYLNLRLYQ RNTQCLHIRK HRLAGFFVRL FVACAFAAQT PLSSAELYFN PRFLADDPQA 61 VADLSRFENG QELPPGTYRV DIYLNNGYMA TRDVTFNTGD SEQGIVPCLT RAQLASMGLN 121 TASVSGMNLL ADDACVPLTS MIHDATAHLD VGQQRLNLTI PQAFMSNRAR GYIPPELWDP 181 GINAGLLNYN FSGNSVQNRI GGNSHYAYLN LQSGLNIGAW RLRDNTTWSY NRSDRSSGSK 241 NKWQHINTWL ERDIIPLRSR LTLGDGYTQG DIFDGINFRG AQLASDDNML PDSQRGFAPV 301 IHGIARGTAQ VTIKQNGYDI YNSTVPPGPF TINDIYAAGN SGDLQVTIKE ADGSTQIFTV 361 PYSSVPLLQR EGHTRYSITA GEYRSGNAQQ EKPRFFQSTL LHGLPAGWTI YGGTQLADRY 421 RAFNFGIGKN MGALGALSVD MTQANSTLPD DSQHDGQSVR FLYNKSLNES GTNIQLVGYR 481 YSTSGYFNFA DTTYSRMNGY NIETQDGVIQ VKPKFTDYYN LAYNKRGKLQ LTVTQQLGRT 541 STLYLSGSHQ TYWGTSNVDE QFQAGLNTAF EDINWTLSYS LTKNAWQKGR DQMLALNVNI 601 PFSHWLRSDS KSQWRHASAS YSMSHDLNGR MTNLAGVYGT LLEDNNLSYS VQTGYAGGGD 661 GNSGSTGYAT LNYRGGYGNA NIGYSHSDDI KQLYYGVSGG VLAHANGVTL GQPLNETVVL 721 VKAPGAKDAK VENQTGVRTD WRGYAVLPYA TEYRENRVAL DTNTLADNVD LDNAVANVVP 781 TRGAIVRAEF KARVGIKLLM TLTHNNKPLP FGAMVTSESS QSSGIVADNG QVYLSGMPLV 841 NRPGFPGECF ICELRLPDHR FRWKHNKLFL LLPEEYGPAF PAIVDCYTSP PTLVWPVPLL 901 HGFSSSYGVL PPLCKDH //