LOCUS       BBF56582.1               917 aa    PRT              BCT 27-JUL-2018
DEFINITION  Escherichia coli outer membrane usher protein FimD protein.
ACCESSION   AP018802-5050
PROTEIN_ID  BBF56582.1
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5357442)
  AUTHORS   Kusumoto,M. and Akiba,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases.
            Contact:Masahiro Kusumoto
            National Institute of Animal Health; Chuzan 2702, Kagoshima,
            Kagoshima 891-0105, Japan
REFERENCE   2
  AUTHORS   Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M.
  TITLE     Genomic analysis of colistin resistant EHEC isolated from cattle
            in Japan.
  JOURNAL   Unpublished (2018)
COMMENT     Annotated using prokka 1.11 from http://www.vicbioinformatics.com.
            Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: RS HGAP Assembly v. 3.0
            Genome Coverage       :: 176x
            Sequencing Technology :: PacBio RSII
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2013"
                     /country="Japan"
                     /db_xref="taxon:562"
                     /host="Bos taurus"
                     /isolation_source="feces"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli"
                     /strain="E2863"
     protein         /gene="fimD_8"
                     /inference="ab initio prediction:Prodigal:2.6"
                     /inference="similar to AA sequence:INSD:BAI38888.1"
                     /locus_tag="E2863_05174"
                     /transl_table=11
BEGIN
        1 MSYLNLRLYQ RNTQCLHIRK HRLAGFFVRL FVACAFAAQT PLSSAELYFN PRFLADDPQA
       61 VADLSRFENG QELPPGTYRV DIYLNNGYMA TRDVTFNTGD SEQGIVPCLT RAQLASMGLN
      121 TASVSGMNLL ADDACVPLTS MIHDATAHLD VGQQRLNLTI PQAFMSNRAR GYIPPELWDP
      181 GINAGLLNYN FSGNSVQNRI GGNSHYAYLN LQSGLNIGAW RLRDNTTWSY NRSDRSSGSK
      241 NKWQHINTWL ERDIIPLRSR LTLGDGYTQG DIFDGINFRG AQLASDDNML PDSQRGFAPV
      301 IHGIARGTAQ VTIKQNGYDI YNSTVPPGPF TINDIYAAGN SGDLQVTIKE ADGSTQIFTV
      361 PYSSVPLLQR EGHTRYSITA GEYRSGNAQQ EKPRFFQSTL LHGLPAGWTI YGGTQLADRY
      421 RAFNFGIGKN MGALGALSVD MTQANSTLPD DSQHDGQSVR FLYNKSLNES GTNIQLVGYR
      481 YSTSGYFNFA DTTYSRMNGY NIETQDGVIQ VKPKFTDYYN LAYNKRGKLQ LTVTQQLGRT
      541 STLYLSGSHQ TYWGTSNVDE QFQAGLNTAF EDINWTLSYS LTKNAWQKGR DQMLALNVNI
      601 PFSHWLRSDS KSQWRHASAS YSMSHDLNGR MTNLAGVYGT LLEDNNLSYS VQTGYAGGGD
      661 GNSGSTGYAT LNYRGGYGNA NIGYSHSDDI KQLYYGVSGG VLAHANGVTL GQPLNETVVL
      721 VKAPGAKDAK VENQTGVRTD WRGYAVLPYA TEYRENRVAL DTNTLADNVD LDNAVANVVP
      781 TRGAIVRAEF KARVGIKLLM TLTHNNKPLP FGAMVTSESS QSSGIVADNG QVYLSGMPLV
      841 NRPGFPGECF ICELRLPDHR FRWKHNKLFL LLPEEYGPAF PAIVDCYTSP PTLVWPVPLL
      901 HGFSSSYGVL PPLCKDH
//