LOCUS BBF50732.1 3223 aa PRT BCT 27-JUL-2018 DEFINITION Escherichia coli adherence factor Efa1 protein. ACCESSION AP018796-5092 PROTEIN_ID BBF50732.1 SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5470440) AUTHORS Kusumoto,M. and Akiba,M. TITLE Direct Submission JOURNAL Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases. Contact:Masahiro Kusumoto National Institute of Animal Health; Chuzan 2702, Kagoshima, Kagoshima 891-0105, Japan REFERENCE 2 AUTHORS Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M. TITLE Genomic analysis of colistin resistant EHEC isolated from cattle in Japan. JOURNAL Unpublished (2018) COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP Assembly v. 3.0 Genome Coverage :: 143x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2001" /country="Japan" /db_xref="taxon:562" /host="Bos taurus" /isolation_source="feces" /mol_type="genomic DNA" /organism="Escherichia coli" /strain="E2855" protein /gene="efa1/lifA" /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:BAI32294.1" /locus_tag="E2855_05216" /transl_table=11 BEGIN 1 MRLPEKVLFP PVTSGLSGQE KQKKPKSITG FQENYQRNIR PIKTASEARL RFFDKMVSKE 61 NSLEDVVSLG EMIQKEIYGH EQRTFSPVHH TGNWKSSLLH NALLGLANVY NGLRETEYPN 121 TFNRDGIKST NSFRDNLLTK TRTPRDNFEE GIKHPEHATI PYDNDNESNK LLKAGKIAGN 181 NNELLMEIKK ESQSDHQIPL SDKFLKRKKR SPVAEDKVQN SLTPENFVQK ISLSDELKTK 241 YANEIIEIKR IMGEYNLLPD KNSRNGLKLL QKQADLLKII MEDTSVTENT FKNIEMAITD 301 IKREYYSHTV DIEKNIHAIW VAGSPPESIS DYIKTFLKTY KEFTYYLWVD EKAFGAAKFT 361 SVLKQIAFDL ACRTIQQNTP QKNIDFINLY NEIRKKYNNN PSGQQEYLNK LRELYATYQK 421 ISTPLKHMFN SFFLENMIKL QDNFFNYCIV KGVTEINDEL RINYLKNVIK LSDDDIGNYQ 481 KTINDNKDRV KKLILDLQKQ FGENRISIKD VNSLTSLSKS ENNHNYQTEM LLRWNYPAAS 541 DLLRMYILKE HGGIYTDTDM MPAYSKQVIF KIMMQTNGDN RFLEDLKLRR AISDGVLRYV 601 NNQNIDEVNY NEISDADKNI IKKILTEISK MPEDSIFTKI NTRIPRDTMP ILRRYHLWPD 661 GWNIRGLNGF MLSHKGSEVI DAVIAGQNQA YRELRRIRDN IHSEIYFKQT DELSSLPDTD 721 KIGGILVKKY LSGSLFSKFR QDTIIPEALS TLQISGPDLI QRKMLQFFRS RGVLGEEFIN 781 ERKLSDKAYI GVYKTTGTGK YDWLTPESIG VNDVTPADES TWCIGKGRCV DDFLFKDVST 841 LKTENLPELF LTKIDTDTFF SQWSTKTKKD LQKKIQDLTV RYNELIDSST IDFKNLYEID 901 QMLHMIMLEM NDDIAKRSLF SLQVQIAEKI RRMTIPVDNI INIYPDLHKK NDNDLSMSIK 961 GFLASNPHTK INILYSNKTE HNIFIKDLFS FAVMENELRD IINNMSKDKT PENWEGRVML 1021 QRYLELKMKD HLSLQSSQEA NEFLEISTFI YENDFLREKI EAVKNKMNSH ELYFEKIKKE 1081 QNTWQDLSTK EQKLQLIKAL KEISGNTEKD SHYDRLLDAF FKKHNENIHN KIQRIKDEFK 1141 EYSRVAIHNI DKVIFKGQTL DRLYHEGYVF SDINTLSRYT LHGLGITGVH TEENLLPAPS 1201 SSLINILKEH YNEDEISAKL PLAYDYILNK KESSSIPVEI LNKLSELPPH ELLTPVLGQS 1261 VNPLGMGYSS DNGKITEQVI VSGADGFDNP ISGLIYTYLE DLYNIHVRMR EGTLNSQNLR 1321 QLLENSVSSC FLTEQSINKL LSEAEKRPYQ SLTEIHQHLT GLPTIADATL SLLSVGLPGT 1381 GKLLRREQDY GRPPVTAIQD STFVLPYNFK GIGFNDNIIS SAPVASSLHF IAEHAKYTLL 1441 SWPEFYRHHA QRWFEMAKGY GSQNIDFHPQ SLLVTQEGRC MGLALLYLQT EDTAHYSILQ 1501 ENLMTVSALH QTSNRDKLPL SKDDNSLMTR TYSLIEMLQY QGNKYITNES LLHKTAWNQE 1561 RITLLFNEKG VKRALISTPN HTLVLQQLED IYRLTDPNFG HADFLSPIDA LKFIEAMIQL 1621 TPTLQEYYGL LNKDINKHIQ VHYAESDMVW NKLLPENDAG LSTRIQHTTT DRLANLAEPV 1681 AVAGISLPVK TLYDIGATLD GRRITSPPTS EQIPSLRLNG DVLNDYLSRT VLTPEQADNI 1741 RKILHTQGIR SGTRPIDPEM IRGTQDDLVS SQTRLQRQAT RVKQQLAGVL DTLQQHFQNI 1801 PRSSGRHLSV ENIELADIGS GRFNLQIRDG ETLHTTSVEV PEVVSRFQKL STMLSALPAS 1861 GIMDFDLGMS VVGVVQYARL LQQGHEDSTL AKINLAMDIK QLSEATLGSM IQIAGNKFLN 1921 TEGIQGFRLE SAVAEGMRSV ATRTGGTMGK ALSASARVLE LPVLETVLGT WNLYNSVIQL 1981 QQATSYSETM AARVQIAFDS ISLGLTAASV AFPPLIIATG PIAAIGMGAS SIARNVARKE 2041 ERHTQWLEYK KFLTDGSKHI VVASPERGLL DFSGNKVFGK MVLDLRQSPP LLHGESSFNA 2101 DRKIGHRPDL GDWQIREKVG YANSISPYSS LAHGYANSKW PRTIPKIPSG EYDTIILGYG 2161 HQYQANTEIE YLSNWIVWRE AVPDSTSRHK RPPLEVLNSQ CTVIAGERKT TVLPLRVLSD 2221 LTPECTEQAI SLKDYKFILR GGSGGLAVQV GGAGYYDIDA NPVAKENTLS FRGLPEEFPL 2281 TFDLSKQTQS VMLKTPDDEV PVMTITQKGI NTLVGTAAGK DRLIGNDKDN TFHTSSGGGT 2341 VISGGGNNRY IIPRDLKTPL TLTLSSNSVS HEIFLPETTL AELKPVAFEL SLIYWAGNNI 2401 NVQPEDEAKL NHFAGNFRVH TRDGMTLEAV SRENGIQLAI SLCDVQRWQA VYPEENNRPD 2461 AILDRLHDMG WSLTPEVRFQ GGETQVSYDP LTRQLVYQLQ ARYSEFQLAG SRHHTTAVTG 2521 TPGSRYIIMK PVTTQILPTQ IILAGDNDHP ETIDLLEASP VLVEGKKDKN SVILTIATIQ 2581 YSLQLTISGI EESLPETTRV AIQPQDTRLL GDVLRILPDN GNWVGIFRSG HTPTVNRLEN 2641 LMALNQVMTF LPRVSGSAEQ VLCLENLGGV RKKVEGELLS GKLKGAWKAE GEPTVPVNIS 2701 DLSIPPYSRL YLIFEGKNNV LLRSKVHAAP LKITSAGEMQ LSERQWQQQE HIIVKPDNEA 2761 PSLILSEFRR FTISSDKTFS LKLMCHQGMV RIDRRSLSVR LFYLREQPGI GSLRLTFRDF 2821 FTEVMDTTDR EILEKELRPI LIGDTHRFIN AAYKNHLNIQ LGDGVLNLAD IVAEYARIQK 2881 EETSKILYQY QGAMKKKTDG PSVVEDAIMT TTVTTDSGEL FPTFHPWYTD DLSGRYKSVP 2941 MARKADTLYH LTPKGDLQII YQVATKMVNQ AMIVSLPNYR HEWEKYNLSI LSEIPQNNNT 3001 VVHSILRVNG PTMQVRTIDY RGTDENNPIV SFSDTTFING EQMLSYDSHS SGRVYSREEY 3061 MMWELQQRVS EASSARTQDY WLMDAAVRNG EWKITPELLR HTPGYIRSTV SKWSRGWLKT 3121 GTILQTPEDR NTDVYLTTIQ NNVFSRQGGG YQVYYRIDGM AGADIADNAP GETRCTLRPG 3181 TCFEVTSVDE RHYEWNIIYV TLKTCGWSRN GQSKTPNGDN LFN //