LOCUS BBF50479.1 1394 aa PRT BCT 27-JUL-2018 DEFINITION Escherichia coli type IV secretion protein Rhs protein. ACCESSION AP018796-4839 PROTEIN_ID BBF50479.1 SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5470440) AUTHORS Kusumoto,M. and Akiba,M. TITLE Direct Submission JOURNAL Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases. Contact:Masahiro Kusumoto National Institute of Animal Health; Chuzan 2702, Kagoshima, Kagoshima 891-0105, Japan REFERENCE 2 AUTHORS Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M. TITLE Genomic analysis of colistin resistant EHEC isolated from cattle in Japan. JOURNAL Unpublished (2018) COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP Assembly v. 3.0 Genome Coverage :: 143x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2001" /country="Japan" /db_xref="taxon:562" /host="Bos taurus" /isolation_source="feces" /mol_type="genomic DNA" /organism="Escherichia coli" /strain="E2855" protein /gene="rhsD_3" /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:CAV01146.1" /locus_tag="E2855_04948" /transl_table=11 BEGIN 1 MSGKPAARQG DMTQYGGSIV QGSAGVRIGA PTGVACSVCP GGVTSGHPVN PLLGAKVLPG 61 ETDIALPGPL PFILSRTYSS YRTKTPAPVG SLGPGWKMPA DIRLQLRDNT LILSDNGGRS 121 LYFEHLFPGE DGYSRSESLW LVRGGVAKLD EGHRLAALWQ ALPEELRLSP HRYLATNSPQ 181 GPWWLLGWCE RVPEADEVLP APLPPYRVLT GLVDRFGRTQ TFHHEAAGEF SGEITGVTDG 241 AGRHFRLVLT TQAQRAEEAR QQAISGGTEP SAFPDTLPGY TEYGRDNGIR LSAVWLTHDP 301 EYPENLPAAP LVRYGWTPRG ELAAVYDRSN TQVRSFTYDD KYRGRMVAHR HTGRPEICYR 361 YDSDGRVTEQ LNPAGLSYTY QYEKDRITIT DSLNRREVLH TQGEAGLKRV VKKEHADGSV 421 TQSQFDAVGR LKAQTDAAGR TTEYSPDVVT GLITRITTPD GRASAFYYNH HNQLTSATGP 481 DGLELRREYD ESGRLIQETA PDGDITRYRY DNPHSDLPCA TEDATGSRKT MTWSRYGQLL 541 TFTDCSGYVT RYDHDRFGQV TAVHREEGLS QYHAYDSRGQ LTAVKDTQGH ETRYEYNIAG 601 DLTAVIAPDG SRNGTQYDAW GKAICTTQGG LTRSMEYDAA GRVIRLTSEN GSHTTFRYDV 661 LDRLIQETGF DGRTQRYHHD LTGKLIRSED EGLVTHWYYD EADRLTHRTV KGETAERWQY 721 DERGWLTDIS HISEGHRVAV HYGYDSKGRL ASEHLTVHHP QTEALLWQHE TRHAYNAQGL 781 ANRCIPDSLP AVEWLTYGSG WLSGMKLGDT PLVEYTRDRL HRETLRRFGR YELTTAYTPA 841 GQLQRQHLNS LQYDRDYTWN DNGELIRISS PRQTRSYSYS TTGRLTSVHT TAANLDIRIP 901 YATDPAGNRL PDPELHPDST LSMWPDNRIA RDAHYLYRYD RHGRLTEKTD LIPEGGIRTD 961 DERTHRYHYD SQHRLVHYTR TQYAEPLVES RYLYDPLGRR VAKRVWRRER DLTGWMSLSR 1021 KPQVTWYGWD GDRLTTIQND RSRIQTIYQP GSFTPLIRVE TATGELARTQ RRSLADALQQ 1081 SGGEDGGSVV FPPVLVQMLD RLESEILAAR VSEESRRWLA SCGLTVEQMQ NQMDPVYTPA 1141 RKIHLYHCDH RGLPLALISK EGTTEWCAEY DEWGNLLNEE NPHQLQQLIR LPGQQYDEES 1201 GLYYNRHRYY DPLQGRYITQ DPIGLKGGWN LYTYPLSPVN SMDPLGLYEF KSKNIDDIGI 1261 FALAMCNGES INENKEYGGL ICKKQGEYFP MNPISSNDND SVDLRNIKCP EGSERVGDYH 1321 THGFYSDDKG NKVTKENDVY DSLNFSSKDL TNSYMNGMGK KEYSSYLGTP NNTYLKYNPK 1381 AKGNGVTIIR QGSN //