LOCUS       BBF49652.1               838 aa    PRT              BCT 27-JUL-2018
DEFINITION  Escherichia coli outer membrane usher protein FimD protein.
ACCESSION   AP018796-4012
PROTEIN_ID  BBF49652.1
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5470440)
  AUTHORS   Kusumoto,M. and Akiba,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases.
            Contact:Masahiro Kusumoto
            National Institute of Animal Health; Chuzan 2702, Kagoshima,
            Kagoshima 891-0105, Japan
REFERENCE   2
  AUTHORS   Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M.
  TITLE     Genomic analysis of colistin resistant EHEC isolated from cattle
            in Japan.
  JOURNAL   Unpublished (2018)
COMMENT     Annotated using prokka 1.11 from http://www.vicbioinformatics.com.
            Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: RS HGAP Assembly v. 3.0
            Genome Coverage       :: 143x
            Sequencing Technology :: PacBio RSII
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2001"
                     /country="Japan"
                     /db_xref="taxon:562"
                     /host="Bos taurus"
                     /isolation_source="feces"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli"
                     /strain="E2855"
     protein         /gene="fimD_4"
                     /inference="ab initio prediction:Prodigal:2.6"
                     /inference="similar to AA sequence:INSD:ADD58354.1"
                     /locus_tag="E2855_04095"
                     /transl_table=11
BEGIN
        1 MPQRHHQGHK RTPKQLALII KRCLPMVLTG SGMLCTTANA EEYYFDPIML ETTKSGMQTT
       61 DLSRFSKKYA QLPGTYQVDI WLNKKKVSQK KITFTANAEQ LLQPQFTVEQ LRELGIKVDE
      121 IPALAEKDDD SVINSLEQII PGTAAEFDFN HQRLNLSIPQ IALYRDARGY VSPSRWDDGI
      181 PTLFTNYSFT GSDNRYRQGN RSQRQYLNMQ NGANFGPWRL RNYSTWTRND QASSWNTISS
      241 YLQRDIKALK SQLLLGESAT SGSIFSSYTF TGVQLASDDN MLPNSQRGFA PTVRGIANSS
      301 AIVTIRQNGY VIYQSNVPAG AFEINDLYPS SNSGDLEVTI EESDGTQRRF IQPYSSLPMM
      361 QRPGHLKYSA TAGRYRADAN SDSKEPEFAE ATAIYGLNNT FTLYGGLLGS EDYYALGIGI
      421 GGTLGALGAL SMDINRADTQ FDNRHSFHGY QWRTQYIKDI PETNTNIAVS YYRYTNDGYF
      481 SFDEANTRNW DYNSRQKSEI QFNISQTIFD GVSLYASGSQ QDYWGNNDKN RNISVGVSGQ
      541 QWGIGYSLNY QYSRYTDQNN DRALSLNLSI PLERWLPRSR VSYQMTSQKD RPTQHEMRLD
      601 GSLLDDGRLS YSLEQSLDDD NNHNSSLNAS YRSPYGTFSA GYSYGNDSSQ YNYGVTGGVV
      661 IHPHGVTLSQ YLGNAFALID ANGASGVRIQ NYPGIATDPF GYAVVPYLTT YQENRLSVDT
      721 TQLPDNVDLE QTTQFVVPNR GAMVAARFNA NIGYRVLVTV SDRNGKPLPF GALASNDETG
      781 QQSIVDEGGI LYLSGISSKS QSWTVRWGNQ ADQQCQFAFS TPDSEPTTSV LQGTAQCH
//