LOCUS BBF47501.1 516 aa PRT BCT 27-JUL-2018 DEFINITION Escherichia coli D,D-dipeptide ABC transporter periplasmic binding protein protein. ACCESSION AP018796-1861 PROTEIN_ID BBF47501.1 SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5470440) AUTHORS Kusumoto,M. and Akiba,M. TITLE Direct Submission JOURNAL Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases. Contact:Masahiro Kusumoto National Institute of Animal Health; Chuzan 2702, Kagoshima, Kagoshima 891-0105, Japan REFERENCE 2 AUTHORS Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M. TITLE Genomic analysis of colistin resistant EHEC isolated from cattle in Japan. JOURNAL Unpublished (2018) COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP Assembly v. 3.0 Genome Coverage :: 143x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2001" /country="Japan" /db_xref="taxon:562" /host="Bos taurus" /isolation_source="feces" /mol_type="genomic DNA" /organism="Escherichia coli" /strain="E2855" protein /gene="ddpA" /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:AAC74560.1" /locus_tag="E2855_01900" /transl_table=11 BEGIN 1 MKRSISFRPT LLALVLATNF PVSHAAVPKD MLVIGKAADP QTLDPAVTID NNDWTVTYPS 61 YQRLVQYKTD GDKGSTDVEG DLASSWKASD DQKEWTFTLK DNAKFADGTP VTAEAVKLSF 121 ERLLKIGQGP AEAFPKDLKI DAPDEHTVKF TLSQPFAPFL YTLANDGASI INPAVLKEHA 181 ADDARGFLAQ NTAGSGPFML KSWQKGQQLV LVPNPHYPGN KPNFKRVSVK IIGESASRRL 241 QLSRGDIDIA DALPVDQLNA LKQENKVNVA EYPSLRVTYL YLNNSKAPLN QADLRRAISW 301 STDYQGMVNG ILSGNGKQMR GPIPEGMWGY DATAMQYNHD ETKAKAEWDK VTSKPTSLTF 361 LYSDNDPNWE PIALATQSSL NKLGINVKLE KLANATMRDR VGKGDYDIAI GNWSPDFADP 421 YMFMNYWFES DKKGLPGNRS FYENSEVDKL LRNALATTDQ TQRTRDYQQA QKIVIDDAAY 481 VYLFQKNYQL AMNKEVKGFV FNPMLEQVFN INTMSK //