LOCUS BBF46617.1 866 aa PRT BCT 27-JUL-2018 DEFINITION Escherichia coli outer membrane usher protein FimD protein. ACCESSION AP018796-977 PROTEIN_ID BBF46617.1 SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5470440) AUTHORS Kusumoto,M. and Akiba,M. TITLE Direct Submission JOURNAL Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases. Contact:Masahiro Kusumoto National Institute of Animal Health; Chuzan 2702, Kagoshima, Kagoshima 891-0105, Japan REFERENCE 2 AUTHORS Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M. TITLE Genomic analysis of colistin resistant EHEC isolated from cattle in Japan. JOURNAL Unpublished (2018) COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP Assembly v. 3.0 Genome Coverage :: 143x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2001" /country="Japan" /db_xref="taxon:562" /host="Bos taurus" /isolation_source="feces" /mol_type="genomic DNA" /organism="Escherichia coli" /strain="E2855" protein /gene="fimD_2" /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:AAC74026.1" /locus_tag="E2855_01002" /transl_table=11 BEGIN 1 MYRTHRQHSL LSSGGVPSFI GGLVVFVSAA FNAQAETWFD PAFFKDDPSM VADLSRFEKG 61 QKITPGVYRV DIVLNQTIVD TRNVNFVEIT PEKGIAACLT TESLDAMGVN TDAFPAFKQL 121 DKQACVPLAE IIPDASVTFN VNKLRLEISV PQIAIKSNAR GYVPPERWDE GINALLLGYS 181 FSGANSIHSS ADSDSGDSYF LNLNSGVNLG PWRLRNNSTW SRSSGQTAEW KNLSSYLQRA 241 VIPLKGELTV GDDYTAGDFF DSVSFRGVQL ASDDNMLPDS LKGFAPVVRG IAKSNAQITI 301 KQNGYTIYQT YVSPGAFEIS DLYSTSSSGD LLVEIKEADG SVNSYSVPFS SVPLLQRQGR 361 IKYAVTLAKY RTNSNEQQES KFAQATLQWG GPWGTTWYGG GQYAEYYRAA MFGLGFNLGD 421 FGAISFDATQ AKSTLADQSE HKGQSYRFLY AKTLNQLGTN FQLMGYRYST SGFYTLSDTM 481 YKHMDGYEFN DGDDEDTPMW SRYYNLFYTK RGKLQVNISQ QLGEYGSFYL SGSQQTYWHT 541 DQQDRLLQFG YNTQIKDLSL GVSWNYSKSR GQPDADQVFA LNFSLPLNLL LPRSNDSYTR 601 KKNYAWMTSN TSIDNEGHIT QNLGLTETLL DDGNLSYSVQ QGYNSEGKTA NGSASMDYKG 661 AFADARVGYN YSDNGSQQQL NYALSGSLVA HSQGITLGQS LGETNVLIAA PGAENTRVAN 721 STGLKTDWRG YTVVPYATSY RENRIALDAA SLKRNVDLEN AVVNVVPTKG ALVLAEFNAH 781 AGARVLMKTS KQGIPLRFGA IATLDGIQTN SGIIDDDGSL YMSGLPAQGA ITVRWGEAPD 841 QICHISYQLT EQQINSAITR MDAICR //