LOCUS       BBF46617.1               866 aa    PRT              BCT 27-JUL-2018
DEFINITION  Escherichia coli outer membrane usher protein FimD protein.
ACCESSION   AP018796-977
PROTEIN_ID  BBF46617.1
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5470440)
  AUTHORS   Kusumoto,M. and Akiba,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases.
            Contact:Masahiro Kusumoto
            National Institute of Animal Health; Chuzan 2702, Kagoshima,
            Kagoshima 891-0105, Japan
REFERENCE   2
  AUTHORS   Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M.
  TITLE     Genomic analysis of colistin resistant EHEC isolated from cattle
            in Japan.
  JOURNAL   Unpublished (2018)
COMMENT     Annotated using prokka 1.11 from http://www.vicbioinformatics.com.
            Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: RS HGAP Assembly v. 3.0
            Genome Coverage       :: 143x
            Sequencing Technology :: PacBio RSII
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2001"
                     /country="Japan"
                     /db_xref="taxon:562"
                     /host="Bos taurus"
                     /isolation_source="feces"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli"
                     /strain="E2855"
     protein         /gene="fimD_2"
                     /inference="ab initio prediction:Prodigal:2.6"
                     /inference="similar to AA sequence:INSD:AAC74026.1"
                     /locus_tag="E2855_01002"
                     /transl_table=11
BEGIN
        1 MYRTHRQHSL LSSGGVPSFI GGLVVFVSAA FNAQAETWFD PAFFKDDPSM VADLSRFEKG
       61 QKITPGVYRV DIVLNQTIVD TRNVNFVEIT PEKGIAACLT TESLDAMGVN TDAFPAFKQL
      121 DKQACVPLAE IIPDASVTFN VNKLRLEISV PQIAIKSNAR GYVPPERWDE GINALLLGYS
      181 FSGANSIHSS ADSDSGDSYF LNLNSGVNLG PWRLRNNSTW SRSSGQTAEW KNLSSYLQRA
      241 VIPLKGELTV GDDYTAGDFF DSVSFRGVQL ASDDNMLPDS LKGFAPVVRG IAKSNAQITI
      301 KQNGYTIYQT YVSPGAFEIS DLYSTSSSGD LLVEIKEADG SVNSYSVPFS SVPLLQRQGR
      361 IKYAVTLAKY RTNSNEQQES KFAQATLQWG GPWGTTWYGG GQYAEYYRAA MFGLGFNLGD
      421 FGAISFDATQ AKSTLADQSE HKGQSYRFLY AKTLNQLGTN FQLMGYRYST SGFYTLSDTM
      481 YKHMDGYEFN DGDDEDTPMW SRYYNLFYTK RGKLQVNISQ QLGEYGSFYL SGSQQTYWHT
      541 DQQDRLLQFG YNTQIKDLSL GVSWNYSKSR GQPDADQVFA LNFSLPLNLL LPRSNDSYTR
      601 KKNYAWMTSN TSIDNEGHIT QNLGLTETLL DDGNLSYSVQ QGYNSEGKTA NGSASMDYKG
      661 AFADARVGYN YSDNGSQQQL NYALSGSLVA HSQGITLGQS LGETNVLIAA PGAENTRVAN
      721 STGLKTDWRG YTVVPYATSY RENRIALDAA SLKRNVDLEN AVVNVVPTKG ALVLAEFNAH
      781 AGARVLMKTS KQGIPLRFGA IATLDGIQTN SGIIDDDGSL YMSGLPAQGA ITVRWGEAPD
      841 QICHISYQLT EQQINSAITR MDAICR
//