LOCUS BBF46328.1 1393 aa PRT BCT 27-JUL-2018 DEFINITION Escherichia coli type IV secretion protein Rhs protein. ACCESSION AP018796-688 PROTEIN_ID BBF46328.1 SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5470440) AUTHORS Kusumoto,M. and Akiba,M. TITLE Direct Submission JOURNAL Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases. Contact:Masahiro Kusumoto National Institute of Animal Health; Chuzan 2702, Kagoshima, Kagoshima 891-0105, Japan REFERENCE 2 AUTHORS Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M. TITLE Genomic analysis of colistin resistant EHEC isolated from cattle in Japan. JOURNAL Unpublished (2018) COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP Assembly v. 3.0 Genome Coverage :: 143x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2001" /country="Japan" /db_xref="taxon:562" /host="Bos taurus" /isolation_source="feces" /mol_type="genomic DNA" /organism="Escherichia coli" /strain="E2855" protein /gene="rhsC_2" /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:CAU96554.1" /locus_tag="E2855_00705" /transl_table=11 BEGIN 1 MSGKPAARQG DMTQYGGSIV QGSAGVRIGA PTGVACSVCP GGVTSGHPVN PLLGAKVLPG 61 ETDIALPGPL PFILSRTYSS YRTKTPAPVG SLGPGWKMPA DIRLQLRDNT LILSDNGGRS 121 LYFEHLFPGE DGYSRSESLW LVRGGVAKLD EGHRLAALWQ ALPEELRLSP HRYLATNSPQ 181 GPWWLLGWCE RVPEADEVLP APLPPYRVLT GLVDRFGRTQ TFHREAAGEF SGEITGVTDG 241 AGRHFRLVLT TQAQRAEEAR QQAISGGTEP SAFPDTLPGY TEYGRDNGIR LSAVWLTHDP 301 EYPENLPAAP LVRYGWTPRG ELAVVYDRSG KQVRSFTYDD KYRGRMVAHR HTGRPEICYR 361 YDSDGRVTEQ LNPAGLSYTY QYEKDRITIT DSLNRREVLH TQGEAGLKRV VKKEHADGSV 421 TQSQFDAVGR LKAQTDAAGR TTEYSPDVVT GLTTPDGRAS AFYYNHHNQL TSATGPDGLE 481 LRREYDESGR LIQETAPDGD ITRYRYDNPH SDLPCATEDA TGSRKTMTWS RYGQLLSFTD 541 CSGYVTRYDH DRFGQVTAVH REEGLSQYHA YDSRGQLTAV KDTQGHETRY EYNIAGDLTA 601 VIAPDGSRNG TQYDAWGKAI CTTQGGLTRS MEYDAAGRVI RLTSENGSHT TFRYDVLDRL 661 IQETGFDGRT QRYHHDLTGK LIRSEDEGLV THWYYDEADR LTHRTVKGET AERWQYDERG 721 WLTDISHISE GHRVAVHYGY DSKGRLASEH LTVHHPQTEA LLWQHETRHA YNAQGLANRC 781 IPDSLPAVEW LTYGSGWLSG MKLGDTPLVE YTRDRLHRET LRRFGRYELT TAYTPAGQLQ 841 RQHLNSLQYD RDYTWNDNGE LIRISSPRQT RSYSYSTTGR LTSVHTTAAN LDIRIPYATD 901 PAGNRLPDPE LHPDSTLSMW PDNRIARDAH YLYRYDRYGR LTEKTDLIPE GGIRTDDERT 961 HRYHYDSQHR LVHYTRTQYA EPLVESRYLY DPLGRRVAKR VWRRERDLTG WMSLSRKPQV 1021 TWYGWDGDRL TTIQNDRSRI QTIYQPGSFT PLIRVETATG ELARTQRRSL ADALQQSGGE 1081 DGGSVVFPPV LVQMLDRLES EILADRVSEE SRRWLASCGL TVEQMQNQMD PVYTPARKIH 1141 LYHCDHRGLP LALISKEGTT EWCAEYDEWG NLLNEENPHQ LQQLIRLPGQ QYDEESGLYY 1201 NRHRYYDPLQ GRYITQDPIG LKGGWNFYQY PLNPISNIDP LGLETLKCIK PLHSMGGTGE 1261 RSGPDIWGNP FYHQYLCVPD GKGDYTCGGQ DQRGESKGDG LWGPGKASND TKEAAGRCDL 1321 VETDNSCVEN CLKGKFKEVR PRYSVLPDIF TPINLGLFKN CQDWSNDSLE TCKMKCSGNN 1381 IGRFIRFVFT GVM //