LOCUS BBF46060.1 1256 aa PRT BCT 27-JUL-2018 DEFINITION Escherichia coli type IV secretion protein Rhs protein. ACCESSION AP018796-420 PROTEIN_ID BBF46060.1 SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5470440) AUTHORS Kusumoto,M. and Akiba,M. TITLE Direct Submission JOURNAL Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases. Contact:Masahiro Kusumoto National Institute of Animal Health; Chuzan 2702, Kagoshima, Kagoshima 891-0105, Japan REFERENCE 2 AUTHORS Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M. TITLE Genomic analysis of colistin resistant EHEC isolated from cattle in Japan. JOURNAL Unpublished (2018) COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP Assembly v. 3.0 Genome Coverage :: 143x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2001" /country="Japan" /db_xref="taxon:562" /host="Bos taurus" /isolation_source="feces" /mol_type="genomic DNA" /organism="Escherichia coli" /strain="E2855" protein /gene="rhsC_1" /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:ABV18137.1" /locus_tag="E2855_00430" /transl_table=11 BEGIN 1 MSGKPAARQG DMTQYGGPIV QGSAGVRIGA PTGVACSVCP GGMTSGNPVN PLLGAKVQPG 61 ETDLALPGPL PFILSRTYSS YRTKTPAPVG VFGPGWKAPS DIRLQIRDDA LILNDNGGRS 121 IHFEPLLPGE AVYSRSESMW LVRGGKAAQP DGHTLARLWA SLPPDIRLSP HLYLATNSAQ 181 GPWWILGWSE RVPGAEDLLP APLPPYRVLT GMADRFGRTL AYRREAAGDL AGEITGVTDG 241 AGREFRLVLT TQAQRAEEAR KPHTASLSSP DSPRPLSAPS FPDTLPGTEY GADSGIRLSA 301 VWLMHDPEYP DNLPAAPLVC YDWTPRGELA AVYDRSGTQM RHFTYDDKYR GRMVGHRYAG 361 RPEMRYRYDD AGRVVEQLNP AGLSYRYQYE QDRITVTDSL NRREVLHTEG GAGLKRVVKK 421 ELADGSVTHS GYDAAGRLTA QTDAAGRRTE YGLNVVSGDI TDITTPDGRE TKFYYNDGNQ 481 LTAVVSPDGL ESRREYDEPG RLVSETSRSG ETVRYRYDDA HSELPATTTD ATGSTRQMTW 541 SRYGQLLAFT DCSGYQTRYE YDRFGQMTAV HREEGISLYR HYDNRGRLTS VKDAQGRETQ 601 YEYNAAGDLT AVITPDGNRS ETQYDAWGKA VSTTQGGLTR SMEYDAAGRV ISLTNENGSH 661 SDFSYDALDR LVQQGGFDGR TQRYHYDLTG KLTQSEDEGL VTLWYYDESD RITHRTVNGE 721 PAEQWQYDDH GWLTDISHLS EGHRVAVHYG YDDKGRLTGE RQTVENPETG ELLWQHETTH 781 AYNEQGLANR VTPDSLPPVE WLTYGSGYLA GMKLGDTPLL EYTRDRMHRE TVRSFGSMAG 841 SNAAYKLTST YTPAGQLQSQ HLNSLVYDRD YGWNDNGDLV RISGPRQTRE YGYSATGRLE 901 SVRTLAPGLD IRIPYATDPA GNRLPDPELH PDSTLTAWPD NRIAEDAHYV YHYDEYGRLT 961 EKTDRIPTGV IRTDDERTHH YHYDSQHRLV FHTRIQHGEP LVESRYLYDP LGRRMAKRVW 1021 RRERDLTGWM SLSRKPEETW YGWDGDRLTT VQTDTTRIQT VYQPGSFAPL IRIETDNGER 1081 EKAQCRSLAE KIQQEGSEDG HGVVFPAELV GLLDRLEGEI RANCVSSESR QWLAQCGLTV 1141 ERLAAQIEPV YLPERKIHLY HCDHRGLPLA LISEDGNTAW SAEYDEWGNQ LNEENPHHLH 1201 QPYRLPGQQY DKESGLYYNR NRYYDPLQGR YITQDPIGLE GGMESVCVPA ESGEWY //