LOCUS       BBF46029.1               869 aa    PRT              BCT 27-JUL-2018
DEFINITION  Escherichia coli outer membrane usher protein FimD protein.
ACCESSION   AP018796-389
PROTEIN_ID  BBF46029.1
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5470440)
  AUTHORS   Kusumoto,M. and Akiba,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases.
            Contact:Masahiro Kusumoto
            National Institute of Animal Health; Chuzan 2702, Kagoshima,
            Kagoshima 891-0105, Japan
REFERENCE   2
  AUTHORS   Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M.
  TITLE     Genomic analysis of colistin resistant EHEC isolated from cattle
            in Japan.
  JOURNAL   Unpublished (2018)
COMMENT     Annotated using prokka 1.11 from http://www.vicbioinformatics.com.
            Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: RS HGAP Assembly v. 3.0
            Genome Coverage       :: 143x
            Sequencing Technology :: PacBio RSII
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2001"
                     /country="Japan"
                     /db_xref="taxon:562"
                     /host="Bos taurus"
                     /isolation_source="feces"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli"
                     /strain="E2855"
     protein         /gene="fimD_1"
                     /inference="ab initio prediction:Prodigal:2.6"
                     /inference="similar to AA sequence:INSD:BAB34017.1"
                     /locus_tag="E2855_00399"
                     /transl_table=11
BEGIN
        1 MKIPTTTDIP QRYTWCLAGI CYSSLAILPS FLSYAESYFN PAFLLENGTS VADLSRFERG
       61 NHQPAGVYRV DLWRNDEFIG SQDIVFESTT ENTGDKSGGL MPCFNQVLLE RISLNSSAFP
      121 ELAQQQNNKC INLLKAVPDA TINFDFAAMR LNITIPQIAL LSSAHGYIPP EEWDEGIPAL
      181 LLNYNFTGNR GNGNDSYFFS ELSGINIGPW RLRNNGSWNY FRGNGYHSEQ WNNIGTWVQR
      241 AIIPLKSELV MGDGNTGSDI FDGVGFRGIR LYSSDNMYPD SQQGFAPTVR GIARTAAQLT
      301 IRQNGFIIYQ SYVSPGAFEI TDLHPTSSNG DLDVTIDERD GNQQNYTIPY STVPILQREG
      361 RFKFDLTAGD FRSGNSQQSS PFFFQGTALG GLPQEFTAYG GTQLSANYTA FLLGLGRNLG
      421 NWGTVSLDVT HARSQLADDS RHEGDSIRFL YAKSMNTFGT NFQLMGYRYS TQGFYTLDDV
      481 AYRRMEGYEY DYDYDGEHRD EPIIVNYHNL RFSRKDRLQL NISQSLNDFG SLYISGTHQK
      541 YWNTSDSDTW YQVGYTSSWV GISYSLSFSW NESVGIPDNE RIVGLNVSVP FNVLTKRRYT
      601 RENALDRAYA SFNANRNSNG QNSWLAGVGG TLLEGHNLSY HVSQGDTSNN GYTGSATANW
      661 QAAYGTLGGG YNYDRDQHDV NWQLSGGVVG HENGITLSQP LGDTNVLIKA PGAGGVRIEN
      721 QTGILTDWRG YAVMPYATVY RYNRIALDTN TMGNSIDVEK NISSVVPTQG ALVRANFDTR
      781 IGVRALITVT QGRKPVPFGS LVRENSTGIT SMVGDDGQVY LSGAPLSGEL LVQWGDGANS
      841 RCIAHYVLPK QSLQQAVTVI SAVCTHPGS
//