LOCUS BBF45871.1 1412 aa PRT BCT 27-JUL-2018 DEFINITION Escherichia coli type IV secretion protein Rhs protein. ACCESSION AP018796-231 PROTEIN_ID BBF45871.1 SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5470440) AUTHORS Kusumoto,M. and Akiba,M. TITLE Direct Submission JOURNAL Submitted (20-JUL-2018) to the DDBJ/EMBL/GenBank databases. Contact:Masahiro Kusumoto National Institute of Animal Health; Chuzan 2702, Kagoshima, Kagoshima 891-0105, Japan REFERENCE 2 AUTHORS Kusumoto,M., Misumi,W., Ogura,Y., Hayashi,T. and Akiba,M. TITLE Genomic analysis of colistin resistant EHEC isolated from cattle in Japan. JOURNAL Unpublished (2018) COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP Assembly v. 3.0 Genome Coverage :: 143x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## FEATURES Qualifiers source /collection_date="2001" /country="Japan" /db_xref="taxon:562" /host="Bos taurus" /isolation_source="feces" /mol_type="genomic DNA" /organism="Escherichia coli" /strain="E2855" protein /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:ABV20272.1" /locus_tag="E2855_00238" /transl_table=11 BEGIN 1 MGGKPAARQG DMTRKGLDIV QGSAGVLIGA PTGVACSVCP GGITYANPVN PLLGAKVLPG 61 ETDLALPGPL PFILSRAYSS YRTRTPAPVG VFGPGWKAPF DIRLQIRDEG LILNDNGGRS 121 IHFEPLFPGE ISYSRSESLW LARGGVAEQH SSQPLSALWQ VLPEDVRLSP HVYLATNSLQ 181 GPWWILSWPE RVPGADEVLP PEPPAYRVLT GVVDGFGRTL TFHRAAEGDV AGAVTGVTDG 241 AGRCFHLVLT TQAQRAEAFR KQRATSLSSP AGPRSASSSS AFPDTLPAGT EYGADNGIRL 301 EAVWLTHDPA YPDEQPTAPL ARYTYTASGE LRAVYDRSGT QVRGFTYDAE HAGRMVAHHY 361 AGRPESRYRY DDTGRVTEQV NPEGLDYRFE YGQDRVTITD SLNRREVLYT EGEGGLKRVV 421 KKEHADGSIT RSEYDEAGRL KAQTDAAGRR TEYSLHMASG AVTAVTGPDG RTVRYGYNSQ 481 RQVTSVTYPD GLRSSREYDE KGRLAAETSR SGETTSYSYD DPASELPTGI QDATGSTKQM 541 AWSRYGQLLA FTDCSGYTTR YEYDRYGQQI AVHREEGIST YSSYNPRGQL VSQKDAQGRE 601 TRYEYSAAGD LTATVSPDGK RSTIAYDKRG RPVSVTEGGL TRSMGYDAAG RITVLTNENG 661 SQSTFRYDPV DRLTEQRGFD GRTQRYHYDL TRKLTQSEDE GLITLWHYDA SDRITHRTVN 721 GDPAEQWQYD EHGWLTTLSH TSEGHRVSVH YGYDDKGRLT GERQTVENPE TGELLWQHET 781 KHAYNEQGLA NRVTPDSLPP VEWLTYGSGY LAGMKLGGTP LVEYTRDRLH RETVRSFGSR 841 AGSNAAYELT STYTPAGQLQ SQHLNSLVYD RDYGWNDNGD LVRISGPRQT REYGYSATGR 901 LESVRTLAPG LDIRIPYATD PAGNRLPDPE LHPDSTLTAW PDNRIAEDAH YVYHYDEYGR 961 LTEKTDRIPT GVIRTDDERT HHYHYDSQHR LVFHTRIQHG EPLVESRYLY DPLGRRMAKR 1021 VWRRERDLTG WMSLSRKPEE TWYGWDGDRL TTVQTDTTRI QTVYQPGSFA PLIRIETDNG 1081 EREKAQCRSL AEKIQQEGSE DGHGVVFPAE LVGLLDRLEG EIRANCVSSE SRQWLAQCGL 1141 TVERLAAQIE PVYLPERKIH LYHCDHRGLP LALISEDGNT AWSAEYDEWG NQLNEENPHH 1201 LHQPYRLPGQ QYDKESGLYY NRHRYYDPLQ GRYITPDPIG LRGGWNMYQY PLNPIQVIDP 1261 MGLDAIENMT SGGLIYAVSG VPGLIAANSI TNSAYQFGYD MDAIVGGAHN GAADAMRHCY 1321 LMCRMTKTFG SIIADVIGKN HEAAGDRQGQ PAKERIMDLK NNTVGIACGD FSAKCSDACI 1381 EKYNTGQLFG LDGIKADNPI KAKQGSSDAS NY //