LOCUS BBE14550.1 1401 aa PRT BCT 03-AUG-2018 DEFINITION Vibrio cholerae RNA polymerase beta prime subunit protein. ACCESSION AP018677-3372 PROTEIN_ID BBE14550.1 SOURCE Vibrio cholerae ORGANISM Vibrio cholerae Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 4057041) AUTHORS Yamamoto,S. and Lee,K. TITLE Direct Submission JOURNAL Submitted (17-MAY-2018) to the DDBJ/EMBL/GenBank databases. Contact:Shouji Yamamoto National Institute of Infectious Diseases; Toyama 1-23-1, Tokyo 162-8640, Japan REFERENCE 2 AUTHORS Yamamoto,S., Lee,K., Morita,M., Arakawa,E., Izumiya,H. and Ohnishi,M. TITLE Single Circular Chromosome Identified from the Genome Sequence of the Vibrio cholerae O1 bv. El Tor Ogawa Strain V060002 JOURNAL Genome Announc 6, e00564-18 (2018) REMARK Publication Status: Online-Only DOI:10.1128/genomeA.00564-18 COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 196.55x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## FEATURES Qualifiers source /db_xref="taxon:666" /host="Homo sapiens" /mol_type="genomic DNA" /organism="Vibrio cholerae" /strain="V060002" protein /gene="rpoC" /inference="ab initio prediction:Prodigal:2.6" /inference="similar to AA sequence:INSD:AAC76962.1" /locus_tag="V060002_03477" /transl_table=11 BEGIN 1 MKDLLNFLKA QHKTEEFDAI KIGLASPDMI RSWSFGEVKK PETINYRTFK PERDGLFCAR 61 IFGPVKDYEC LCGKYKRLKH RGVICEKCGV EVTQTKVRRD RMGHIELASP VAHIWFLKSL 121 PSRIGLLMDM PLRDIERVLY FEMYVVTEPG MTDLERGQML TEEEYLDRLE EWGDEFTAKM 181 GAEAIKDLLA SMDLPAEAEQ MREELDTTNS ETKRKKLTKR LKLVEAFVAS GNKPEWMILT 241 VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLELAAPDI IVRNEKRMLQ 301 ESVDALLDNG RRGRAITGSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPY 361 LRLHQCGLPK KMALELFKPF IYSKLETRGL ATTIKAAKKM VEREEAVVWD ILDEVIREHP 421 VLLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTLEAQLEA 481 RTLMMSTNNI LSPASGDPII VPSQDVVLGL YYMTREKINA KGEGMYLTGP AEAEKAYRTK 541 TAELHARVKV RITETIKHEN GKLTTETKMI DTTVGRAMLW QIVPKGLPYS LVNQKLGKKQ 601 ISNLLNEAYR KLGLKDTVIF ADQIMYTGFA YAALSGVSVG IDDMVVPAAK YTEIAEAEEE 661 VREIQEQFQS GLVTAGERYN KVIDIWASTN DRVAKAMMEN LSSEQVINRQ GEQEKQESFN 721 SIYMMADSGA RGSAAQIRQL AGMRGLMARP DGSIIETPIT ANFKEGLNVL QYFISTHGAR 781 KGLADTALKT ANSGYLTRRL VDVAQDVVVT EHDCGTLEGV VMTPHIEGGD VKVALTELAL 841 GRVVSEDILK PGTDEVLIPR NTLLDEKWCK VINDNSVDQI KVRSVVTCDS DFGCCAQCYG 901 RDLARGHLVN QGEAVGVIAA QSIGEPGTQL TMRTFHIGGA ASTAAAENSI QAKNNGSVKL 961 HNAKFVTNKD GKLVITSRAS ELTIIDEFGR TKEKHKLPYG SMLSKADGDA VAAGETVANW 1021 EAHTMPIITE VAGRVQFVDM IDGVTVSRQT DDLTGLSSSE VTEAAARPAA GKDMRPAIKL 1081 VDANGKDVLI PGTDMPAQYF LPGKAIVNLD DGAEVNVGDT LARIPQKSGG NKDITGGLPR 1141 VADLFEARKP KEPAILAEHS GTVSFGKETK GKRRLIITRD SGDTYEEMIP KHRQLNVFEG 1201 ERIERGDVIA DGPESPHDIL RLRGIHAVTT YIANEVQEVY RLQGVKINDK HIETIVRQML 1261 RKCTITFAGD SEFLPGETVE YSQVKIANRK LVEEGKEPAR FERELLGITK ASLATESFIS 1321 AASFQETTRV LTEAAVSGKR DDLRGLKENV IVGRLIPAGT GFAYHQDRQA KRAQEQQGPS 1381 AEQATDNLAA LLNAGFSSDD E //