LOCUS       BAT20271.1               649 aa    PRT              BCT 14-OCT-2015
DEFINITION  Asaia bogorensis NBRC 16594 DNA-directed RNA polymerase
            sigma factor RpoD/sigma70 protein.
ACCESSION   AP014690-1953
PROTEIN_ID  BAT20271.1
SOURCE      Asaia bogorensis NBRC 16594
  ORGANISM  Asaia bogorensis NBRC 16594
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales;
            Acetobacteraceae; Asaia.
REFERENCE   1  (bases 1 to 3198265)
  AUTHORS   Azuma,Y. and Kawai,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-NOV-2014) to the DDBJ/EMBL/GenBank databases.
            Contact:Yoshinao Azuma
            Kindai University, BOST, Department of Science and Technology on
            Food Safety; 930 Nishimitani, Kinokawa, Wakayama 649-6493, Japan
REFERENCE   2
  AUTHORS   Kawai,M., Higashiura,N., Hayasaki,K., Okamoto,N., Takami,A.,
            Hirakawa,H., Matsushita,K. and Azuma,Y.
  TITLE     Complete genome and gene expression analyses of Asaia bogorensis
            reveal unique responses to culture with mammalian cells as a
            potential opportunistic human pathogen
  JOURNAL   DNA Res. 22, 357-366 (2015)
  REMARK    DOI:10.1093/dnares/dsv018
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.0.3
            Genome Coverage       :: 161x
            Sequencing Technology :: Illumina GAIIx; ABI 3100
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /db_xref="taxon:1231624"
                     /mol_type="genomic DNA"
                     /organism="Asaia bogorensis NBRC 16594"
                     /strain="NBRC 16594"
     protein         /gene="rpoD"
                     /inference="COORDINATES:ab initio
                     prediction:GeneMarkS:4.6e"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator:2008/8/19"
                     /inference="COORDINATES:ab initio
                     prediction:glimmer3:3.02"
                     /inference="protein motif:PFAM:PF00140.15"
                     /inference="protein motif:PFAM:PF03979.9"
                     /inference="protein motif:PFAM:PF04539.11"
                     /inference="protein motif:PFAM:PF04542.9"
                     /inference="protein motif:PFAM:PF04545.11"
                     /inference="protein motif:PFAM:PF04546.8"
                     /inference="protein motif:TIGRFAM:TIGR02393"
                     /inference="protein motif:TIGRFAM:TIGR02937"
                     /locus_tag="Asbog_02013"
                     /transl_table=11
BEGIN
        1 MATKAATGTE RNAQDQDGDT NVLDTQSGAV KRLIAKGRER GHITFDELNA VLPQDQMSSE
       61 QIEDIMAIFS EMGIQVVENE ENEDSDEAEE KTEEKEEAEE SEESPTGNVS ESAGRTDDPV
      121 RMYLREMGSV ELLSREGEIA IAKRIEAGRD EMIGGLCESP LTFRAIISWH DKLKEGEMLL
      181 RDIVDLEAMQ GGPSEEETAE SENAEENEDN LDEEPANEEG GDPESSGLSL SALEEKLKPE
      241 ILAHFEAIEP LYDTLRALQV RRIETLTSGS ETSGSSEHEY ETLRMELVKM VEQVHLHNNR
      301 IEELVTQLKV QFQRLNNLEG RMLRMAEGCR VSRDDFLQKY RGYELDPNWL ASVSALPGKS
      361 WKNFTTRYAE QIIDLRNQVA DLAHSTGLPV GEFRRVYAVV SRGERDTTRA KKEMIEANLR
      421 LVISIAKKYT NRGLQFLDLI QEGNIGLMKA VDKFEYRRGY KFSTYATWWI RQAITRSIAD
      481 QARTIRIPVH MIETINKLVR TSRQMLHEIG REPAPEELAE KLGMPLEKVR KVLKIAKEPI
      541 SLETPIGDEE DSHLGDFIED KTAVIPLDAA IQTNLREATT RVLASLTPRE ERVLRMRFGI
      601 GMNTDHTLEE VGQQFNVTRE RIRQIEAKAL RKLKHPSRSR KLRSFLDDN
//