LOCUS BAT20271.1 649 aa PRT BCT 14-OCT-2015 DEFINITION Asaia bogorensis NBRC 16594 DNA-directed RNA polymerase sigma factor RpoD/sigma70 protein. ACCESSION AP014690-1953 PROTEIN_ID BAT20271.1 SOURCE Asaia bogorensis NBRC 16594 ORGANISM Asaia bogorensis NBRC 16594 Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Asaia. REFERENCE 1 (bases 1 to 3198265) AUTHORS Azuma,Y. and Kawai,M. TITLE Direct Submission JOURNAL Submitted (21-NOV-2014) to the DDBJ/EMBL/GenBank databases. Contact:Yoshinao Azuma Kindai University, BOST, Department of Science and Technology on Food Safety; 930 Nishimitani, Kinokawa, Wakayama 649-6493, Japan REFERENCE 2 AUTHORS Kawai,M., Higashiura,N., Hayasaki,K., Okamoto,N., Takami,A., Hirakawa,H., Matsushita,K. and Azuma,Y. TITLE Complete genome and gene expression analyses of Asaia bogorensis reveal unique responses to culture with mammalian cells as a potential opportunistic human pathogen JOURNAL DNA Res. 22, 357-366 (2015) REMARK DOI:10.1093/dnares/dsv018 COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.0.3 Genome Coverage :: 161x Sequencing Technology :: Illumina GAIIx; ABI 3100 ##Genome-Assembly-Data-END## FEATURES Qualifiers source /db_xref="taxon:1231624" /mol_type="genomic DNA" /organism="Asaia bogorensis NBRC 16594" /strain="NBRC 16594" protein /gene="rpoD" /inference="COORDINATES:ab initio prediction:GeneMarkS:4.6e" /inference="COORDINATES:ab initio prediction:MetaGeneAnnotator:2008/8/19" /inference="COORDINATES:ab initio prediction:glimmer3:3.02" /inference="protein motif:PFAM:PF00140.15" /inference="protein motif:PFAM:PF03979.9" /inference="protein motif:PFAM:PF04539.11" /inference="protein motif:PFAM:PF04542.9" /inference="protein motif:PFAM:PF04545.11" /inference="protein motif:PFAM:PF04546.8" /inference="protein motif:TIGRFAM:TIGR02393" /inference="protein motif:TIGRFAM:TIGR02937" /locus_tag="Asbog_02013" /transl_table=11 BEGIN 1 MATKAATGTE RNAQDQDGDT NVLDTQSGAV KRLIAKGRER GHITFDELNA VLPQDQMSSE 61 QIEDIMAIFS EMGIQVVENE ENEDSDEAEE KTEEKEEAEE SEESPTGNVS ESAGRTDDPV 121 RMYLREMGSV ELLSREGEIA IAKRIEAGRD EMIGGLCESP LTFRAIISWH DKLKEGEMLL 181 RDIVDLEAMQ GGPSEEETAE SENAEENEDN LDEEPANEEG GDPESSGLSL SALEEKLKPE 241 ILAHFEAIEP LYDTLRALQV RRIETLTSGS ETSGSSEHEY ETLRMELVKM VEQVHLHNNR 301 IEELVTQLKV QFQRLNNLEG RMLRMAEGCR VSRDDFLQKY RGYELDPNWL ASVSALPGKS 361 WKNFTTRYAE QIIDLRNQVA DLAHSTGLPV GEFRRVYAVV SRGERDTTRA KKEMIEANLR 421 LVISIAKKYT NRGLQFLDLI QEGNIGLMKA VDKFEYRRGY KFSTYATWWI RQAITRSIAD 481 QARTIRIPVH MIETINKLVR TSRQMLHEIG REPAPEELAE KLGMPLEKVR KVLKIAKEPI 541 SLETPIGDEE DSHLGDFIED KTAVIPLDAA IQTNLREATT RVLASLTPRE ERVLRMRFGI 601 GMNTDHTLEE VGQQFNVTRE RIRQIEAKAL RKLKHPSRSR KLRSFLDDN //