LOCUS BAS35305.1 636 aa PRT BCT 15-SEP-2015 DEFINITION Klebsiella pneumoniae penicillin-binding protein 2 protein. ACCESSION AP014950-2445 PROTEIN_ID BAS35305.1 SOURCE Klebsiella pneumoniae ORGANISM Klebsiella pneumoniae Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella. REFERENCE 1 (bases 1 to 5520319) AUTHORS Iwase,T., Ogura,Y., Ishiwata,K., Hayashi,T., Yoneda,M. and Mizunoe,Y. TITLE Direct Submission JOURNAL Submitted (14-SEP-2015) to the DDBJ/EMBL/GenBank databases. Contact:Tadayuki Iwase Jikei University School of Medicine, Bacteriology; 3-25-8 Nishi-shinbashi, Minato-ku, Tokyo 105-8461, Japan REFERENCE 2 AUTHORS Iwase,T., Ogura,Y., Ishiwata,K., Hayashi,T., Yoneda,M. and Mizunoe,Y. TITLE Complete genome sequence of Klebsiella pneumoniae YH43 JOURNAL Unpublished (2015) COMMENT The genome sequence of K. pneumoniae strain YH43 was determined using 454 GS FLX Titanium system. A total of 524,416 single-end reads (218 Mb) and 142,440 8-kb paired-end reads (46 Mb) were assembled with GS Assembler software version 2.6 into one scaffold containing 58 gaps. The finishing was first performed by in silico analysis using GenoFinisher software (http://www.ige.tohoku.ac.jp/joho/gf_e/) and then remaining gaps were closed by sequencing of gap-spanning PCR products using an ABI3130xl DNA sequencer. To correct sequence error by resequencing of YH43 genome, a paired-end library of YH43 was constructed using the TruSeq DNA Sample Prep kit and sequenced by the Illumina MiSeq platform (2x150 bp). The mapping of obtained 2,085,021 reads (626 Mb) to YH43 genome sequence and the SNPs-calling were performed using BWAand SAMtools, respectively. Total 38 in-dels were corrected by the resequencing. The gene identification and annotation were conducted by the Microbial Genome Annotation Pipeline (MiGAP). ##Genome-Assembly-Data-START## Assembly Method :: GS Assembler software v. 2.6 Genome Coverage :: 40x Sequencing Technolog :: 454 GS FLX; Illumina MiSeq ##Genome-Assembly-Data-END## FEATURES Qualifiers source /db_xref="taxon:573" /mol_type="genomic DNA" /organism="Klebsiella pneumoniae" /strain="YH43" protein /locus_tag="KPYH43_c2445" /transl_table=11 BEGIN 1 MPLLRDEIRD HSAEEMLFIR RAAIAFLLVV VCFGVLIVNL YHLQVEQHDF YQTRSNQNDI 61 KMLPIAPSRG LIFDRNGIPL VQNITLYRLQ VIPSKIPDMT ALLQTLTPIV DLTPDDIASF 121 RDDMHHNSRY KAVTLKSDLS DVEVARFAVN EFRFPGVTVE SYQQREYPYG AELAHVVGYV 181 SKINDNDLQR LAKDGEEENY AADHNIGKQG IEGYYEKALH GTTGYQEVEV DNHGRVVRLL 241 KEVPPVAGKN LYLTLDLHLQ QYIESVLKGQ RAAVVVVDPR DGGVLAMVSS PSYDPNPFVK 301 GIGYQAYKSL LDNPDRPLIN RVTQGLYPPA STVKPYMALS ALSAGVITPN TTFFGAPTWT 361 LPGTERRYRD WLKTGHGMLN VTKAIEESAD TFFYQVAFEM GIDRIHEWLS KFGYGQSTGI 421 DLNEEYAGVL PSRAWKQRVH KKPWYQGDTI SVGIGQGYWI STPIQMVKAL TTLLNNGKVQ 481 DPHLLYSMKQ GNHVERYQQP ANLPQVGDPK SPYWGIVRNG MYGMANLPNG TGYKLFHTAP 541 YQIAAKSGTS QVFSLKQNQT YNAKMIPVRL RDHIFYTLFA PYQHPKVAMA LILENGGGDG 601 VVAGPTARAI LDHIFVPQQA SSAAADVPQR DSADAQ //