LOCUS BAS34343.1 564 aa PRT BCT 15-SEP-2015 DEFINITION Klebsiella pneumoniae PTS system, fructose subfamily, IIC subunit protein. ACCESSION AP014950-1483 PROTEIN_ID BAS34343.1 SOURCE Klebsiella pneumoniae ORGANISM Klebsiella pneumoniae Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella. REFERENCE 1 (bases 1 to 5520319) AUTHORS Iwase,T., Ogura,Y., Ishiwata,K., Hayashi,T., Yoneda,M. and Mizunoe,Y. TITLE Direct Submission JOURNAL Submitted (14-SEP-2015) to the DDBJ/EMBL/GenBank databases. Contact:Tadayuki Iwase Jikei University School of Medicine, Bacteriology; 3-25-8 Nishi-shinbashi, Minato-ku, Tokyo 105-8461, Japan REFERENCE 2 AUTHORS Iwase,T., Ogura,Y., Ishiwata,K., Hayashi,T., Yoneda,M. and Mizunoe,Y. TITLE Complete genome sequence of Klebsiella pneumoniae YH43 JOURNAL Unpublished (2015) COMMENT The genome sequence of K. pneumoniae strain YH43 was determined using 454 GS FLX Titanium system. A total of 524,416 single-end reads (218 Mb) and 142,440 8-kb paired-end reads (46 Mb) were assembled with GS Assembler software version 2.6 into one scaffold containing 58 gaps. The finishing was first performed by in silico analysis using GenoFinisher software (http://www.ige.tohoku.ac.jp/joho/gf_e/) and then remaining gaps were closed by sequencing of gap-spanning PCR products using an ABI3130xl DNA sequencer. To correct sequence error by resequencing of YH43 genome, a paired-end library of YH43 was constructed using the TruSeq DNA Sample Prep kit and sequenced by the Illumina MiSeq platform (2x150 bp). The mapping of obtained 2,085,021 reads (626 Mb) to YH43 genome sequence and the SNPs-calling were performed using BWAand SAMtools, respectively. Total 38 in-dels were corrected by the resequencing. The gene identification and annotation were conducted by the Microbial Genome Annotation Pipeline (MiGAP). ##Genome-Assembly-Data-START## Assembly Method :: GS Assembler software v. 2.6 Genome Coverage :: 40x Sequencing Technolog :: 454 GS FLX; Illumina MiSeq ##Genome-Assembly-Data-END## FEATURES Qualifiers source /db_xref="taxon:573" /mol_type="genomic DNA" /organism="Klebsiella pneumoniae" /strain="YH43" protein /locus_tag="KPYH43_c1483" /transl_table=11 BEGIN 1 MKTLLIIDAG LGQARAYMAK TLLGAAAPKA HLELIDNPND AELVIVLGAA LPTDSALNGK 61 QVYLGDINRA VAHPELFLSE AKGHATPYAA PAAAAVPAAT GGPKRIVAVT ACPTGVAHTF 121 MAAEAIETEA KKRGWWVKVE TRGSVGAGNA ITPEEVAEAD LVIVAADIEV DLAKFAGKPM 181 YRTTTGLALK KTALELDKAV AEAKPYQPSG KPQAAGEGKK ESAGAYRHLL TGVSYMLPMV 241 VAGGLCIALS FAFGIKAFEV KDTLAAALMQ IGGGSAFALM VPVLAGFIAF SIADRPGLTP 301 GLIGGMLAVS GGSGFIGGII AGFLAGYVAK AISTKLKLPQ SMEALKPILI IPLVSSLIVG 361 LAMIYLIGKP VAGILTWLTH WLQTMGTANA VLLGAILGAM MCTDMGGPVN KAAYAFGVGL 421 LSTQTYAPMA AIMAAGMVPP LAMGIATLVA RNKFDKGQRE GGKAALVLGL CFISEGAIPF 481 AARDPMRVLP CCIVGGAVTG AISMAIGAKL MAPHGGLFVL LIPGAITPVL GYLLAIIAGT 541 LVAGLSYAVL KRPEAQAVEV EKAA //