LOCUS BAS33437.1 673 aa PRT BCT 15-SEP-2015 DEFINITION Klebsiella pneumoniae 2,4-dienoyl-CoA reductase protein. ACCESSION AP014950-577 PROTEIN_ID BAS33437.1 SOURCE Klebsiella pneumoniae ORGANISM Klebsiella pneumoniae Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella. REFERENCE 1 (bases 1 to 5520319) AUTHORS Iwase,T., Ogura,Y., Ishiwata,K., Hayashi,T., Yoneda,M. and Mizunoe,Y. TITLE Direct Submission JOURNAL Submitted (14-SEP-2015) to the DDBJ/EMBL/GenBank databases. Contact:Tadayuki Iwase Jikei University School of Medicine, Bacteriology; 3-25-8 Nishi-shinbashi, Minato-ku, Tokyo 105-8461, Japan REFERENCE 2 AUTHORS Iwase,T., Ogura,Y., Ishiwata,K., Hayashi,T., Yoneda,M. and Mizunoe,Y. TITLE Complete genome sequence of Klebsiella pneumoniae YH43 JOURNAL Unpublished (2015) COMMENT The genome sequence of K. pneumoniae strain YH43 was determined using 454 GS FLX Titanium system. A total of 524,416 single-end reads (218 Mb) and 142,440 8-kb paired-end reads (46 Mb) were assembled with GS Assembler software version 2.6 into one scaffold containing 58 gaps. The finishing was first performed by in silico analysis using GenoFinisher software (http://www.ige.tohoku.ac.jp/joho/gf_e/) and then remaining gaps were closed by sequencing of gap-spanning PCR products using an ABI3130xl DNA sequencer. To correct sequence error by resequencing of YH43 genome, a paired-end library of YH43 was constructed using the TruSeq DNA Sample Prep kit and sequenced by the Illumina MiSeq platform (2x150 bp). The mapping of obtained 2,085,021 reads (626 Mb) to YH43 genome sequence and the SNPs-calling were performed using BWAand SAMtools, respectively. Total 38 in-dels were corrected by the resequencing. The gene identification and annotation were conducted by the Microbial Genome Annotation Pipeline (MiGAP). ##Genome-Assembly-Data-START## Assembly Method :: GS Assembler software v. 2.6 Genome Coverage :: 40x Sequencing Technolog :: 454 GS FLX; Illumina MiSeq ##Genome-Assembly-Data-END## FEATURES Qualifiers source /db_xref="taxon:573" /mol_type="genomic DNA" /organism="Klebsiella pneumoniae" /strain="YH43" protein /locus_tag="KPYH43_c0577" /transl_table=11 BEGIN 1 MSRYPSLFAP LELGFTTLKN RVLMGSMHTG LEELPDGAQR LAAFYAERAR HGVALIVTGG 61 IAPASSGVTM AGGAVLNDAS HLAHHRHITD AVHQEGGKIA LQILHTGRYS YQPALVAPSA 121 LQAPINRFTP HELSHDEILT LIDDFAHCAQ LAREAGYDGV EVMGSEGYLI NEFLAARTNQ 181 RDDQWGGDYA RRMRFAIEVV KAVRQRAGHD FIIIYRLSML DLVNDGSTLA EVTELAKAIE 241 AAGATIINTG IGWHEARIPT IATPVPRGAF SWVTRKLKGA VSIPLITTNR INDPQVAEDI 301 LARGDADMVS MARPFLADAE FMSKAQNDRA DQINTCIGCN QACLDRIFVG KVTSCLVNPR 361 ACHETLMPVL PANAPKRLAV VGAGPAGLAF AVNAAARGHH VTLFDALPEI GGQFNIAKQI 421 PGKEEFHETL RYYRTMLDLH GVDLRLNTRA TADDLLAFDE TILATGIAPR LPAIAGIDHP 481 KVLSYLDVLR DKAPVGTKVA IIGCGGIGFD TAMYLSQSGA ATSQDIGEFC REWGIDTSLQ 541 TAGGLRPEGP QLSKSPRQIV MLQRKASKPG EGLGKTTGWI HRATLLARGV KMIPAVSYEK 601 IDDEGLHVTI GGERQLLAVD QVIICAGQEP RRELADPLRT AGKTVHLIGG CDVAAELDAR 661 RAIAQGTKLA LAI //