LOCUS BAN52017.1 4924 aa PRT BCT 07-OCT-2016
DEFINITION Pseudomonas putida NBRC 14164 adhesin LapA protein.
ACCESSION AP013070-164
PROTEIN_ID BAN52017.1
SOURCE Pseudomonas putida NBRC 14164
ORGANISM Pseudomonas putida NBRC 14164
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6156701)
AUTHORS Hosoyama,A., Ohji,S., Yamazoe,A. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2013) to the DDBJ/EMBL/GenBank databases.
Contact:Director-General Biological Resource Center
National Institute of Technology and Evaluation, NITE Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Ohji,S., Yamazoe,A., Hosoyama,A., Tsuchikane,K., Ezaki,T. and
Fujita,N.
TITLE The Complete Genome Sequence of Pseudomonas putida NBRC 14164T
Confirms High Intraspecies Variation
JOURNAL Genome Announc 2, e00029-14 (2014)
REMARK Publication Status: Online-Only
DOI:10.1128/genomeA.00029-14
COMMENT Strain NBRC 14164 is available from the NBRC culture collection
(http://www.nbrc.nite.go.jp/e/).
Please visit our website.
URL:http://www.bio.nite.go.jp/ngac/e/
##Genome-Assembly-Data-START##
Assembly Method :: Newbler v. 2.6
Genome Coverage :: 0.6x ABI3730; 17.6x GS-FLX Titanium;
94.3x Illumina HiSeq 1000
Sequencing Technology :: ABI3730; GS-FLX Titanium; Illumina HiSeq
1000 paired-end
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /db_xref="NBRC:14164"
/db_xref="taxon:1211579"
/mol_type="genomic DNA"
/note="type strain of Pseudomonas putida"
/organism="Pseudomonas putida NBRC 14164"
/strain="NBRC 14164"
protein /gene="lapA"
/locus_tag="PP4_01640"
/transl_table=11
BEGIN
1 MSSVVAIVKS IVGQVIAVSP EGIRRVLIEG DRLLAGEEVL TGPGGAVTLE LADGRLLDLG
61 RDSQWSADAP DSSTDLSQAT AQAAPSVEEL QQAIAAGVDP TTELEATAAG PSAAGGGGAL
121 GGGHSFVMLE ETAGRVDATV GFPTEGLGFA TGLDSEEVGL LDTTSNNQVT TPTIDTNVAT
181 DLILGATPSI SEAGGVIVYT ATVGQAPTTN LVVTLSNGAV IVIPAGQTSG SVNVVVPAND
241 TPYIDGGQIS ATVTGTTGGN GLTVTVPQTP AVTQVTDTID TTTATLTANP SVTEGGVITY
301 TVTLSNPAQT PVTVTLSNGQ VITIEAGKTQ GSVDFQTPAN DVYNNGSTVS TTITGATGGN
361 FEQLTPNPAP AETVISDSVD NTTATLTASP SVTEGGVITY TVTLSNPAQT PVTVTLSNGQ
421 IITVEAGKTQ GSVDFQTPPN DVYNNGSTVS VTIENATGGN FEQLTPNPTP AQTTINDSVD
481 TTTATLTASP SVTEGGVITY TVTLSNPAQT PVTVTLSNGQ TITVEAGKTQ GSVDFQTPAN
541 DVYNNGSTVS VTIENATGGN FEQLTPNPTP AQTTINDSVD TTTATLTASP SVTEGGVITY
601 TVTLSNPAQT PVTVTLSNGQ TITVEAGKTQ GSVDFQTPAN DVYNNGSTVS VTIENATGGN
661 FEQLTPNPTP AQTTINDSVD TTTATLTASP SVTEGGVITY TVTLSNPAQT PVTVTLSNGQ
721 TITVEAGKTQ GSVDFQTPAN DVYNNGSTVS VTIENATGGN FEQLTPNPTP AQTTINDSVD
781 TTTATLTASP SVTEGGEITY TITLTNKDGL PINNHAELYF KLTDGTTVVV AANSTTGSAT
841 ATAPDNVYVG TNQPVVNAID AVSGADAWKF ENLNLDKTPV STQVTDEPGT PGNEGDLVKV
901 TITADQTSVA ENVKPTFTVH VNQPLDHDLV VTLSNNAQVT IKAGETSAPY THDAQGDDVY
961 KDSGEISLGI NSAVDATGAT FENLQLGGAA TVQVTDTTDE VVAKLTATPS VTEGGEITYT
1021 ITLTNKDGLP INNHGALTFT LSDGKTVITV PANGTSGSIT VTAPDNVYVG SNTPVVQSIA
1081 TVAGADVGKF EQLTLDKTPV STTVTDEPGS GTPGTGNQGD LVQVTITADQ TSVAENVKPT
1141 FTVHINQPLD HDLVVTLSNN AQVTIKAGDT SAPYTHDAQG DDVYNDAGEI SVGIKSAVDA
1201 TGATFENLEL GGAAKVDVTD TTDEVVAKLT ATPSVTEGGE ITYTITLTNK DGLPINNHGA
1261 LTFTLSDGKT VITVPANGTT GSITVTAPDN VYVGSNPAVV NSIATVAGAD VGKFEQLTLD
1321 KTPVSTTVTD EPGTPGNPGG NNEGDLVKVT ITADQTSVAE NVKPTFTVHI NQPLDHDLVV
1381 TLSNNAQVTI KAGDTSAPYT HDAQGDDVYN DAGEISVGIK SAVDVDGRTF ENLELGGAAK
1441 VDVTDTTDEV VAKLTATPSV TEGGEITYTI TLTNKDGLPI NNHGALTFTL SDGKTVITVP
1501 ANGTSGAISV TAPDNVYVGS NPAVVNSIAT VAGADVGKFE QLTLDKTPVS TTVTDEPGSG
1561 TPGTGNQGDL VQVTITADQT SVAENVKPTF TVHINQPLDH DLVVTLSNNA QVTIKAGDTS
1621 APYEHAAQGD DVYNDAGQIS LGINSAVDAT GATFENLQLG GAATVQVTDT TDEVVAKLTA
1681 TPSVTEGGEI TYTITLTNKD GLPINNHGAL TFTLSDGKTV ITVPANGTSG SVTVTAPDNV
1741 YVGSNPAVVN SIATVAGADV GKFEQLTLDK TPVSTTVTDE PGTPGNPGTP GGNNEGDLVK
1801 VTITADQTSV AENVKPTFTV HINQPLDHDL VVTLSNNAQV TIKAGDTSAP YTHDAQGDDV
1861 YNDAGEISVG IKSAVDVDGR TFENLELGGA AKVDVTDTTD EVVAKLTATP SVTEGGEITY
1921 TITLTNKDGL PINNHGALTF TLSDGKTVIT VPANGTSGAI SVTAPDNVYV GSNPAVVNSI
1981 ATVAGADVGK FEQLTLDKTP VSTTVTDEPG SGTPGTGNQG DLVQVTITAD QTSVAENVKP
2041 TFTVHINQPL DHDLVVTLSN NAQVTIKAGD TSAPYEHAAQ GDDVYNDAGQ ISLGINSAVD
2101 ATGATFENLQ LGGAATVQVT DTTDEVVAKL TATPSVTEGG EITYTITLTN KDGLPINNHG
2161 ALTFTLSDGK TVITVPANGT SGSVTVTAPD NVYVGSNPAV VNSIATVAGA DVGKFEQLTL
2221 DKTPVSTTVT DEPGTPGNPG TPGGNNEGDL VKVTITADQT SVAENVKPTF TVHINQPLDH
2281 DLVVTLSNNA QVTIKAGDTS APYEHAAQGD DVYNDAGEIS VGIKSAVDVD GRTFENLELG
2341 GAAKVDVTDT TDEVVAKLTA TPSVTEGGEI TYTITLTNKD GLPINNHGAL TFTLSDGKTV
2401 ITVPANGTSG AISVTAPDNV YVGSNPAVVN SIATVAGADV GKFEQLTLDK TPVSTQVTDE
2461 PGTPGNPGTP GGNNEGDLVK VTITADQTSV AENVKPTFTV HINQPLDHDL VVTLSNNAQV
2521 TIKAGDTSAP YEHAAQGDDV YNDAGEISVG IKSAVDVDGR TFENLELGGA AKVDVTDTTD
2581 EVVAKLTATP SVTEGGEITY TITLTNKDGL PINNHGALTF TLSDGKTVIT VPANGTSGSI
2641 TVTAPDNVYV GSNTPVVQSI ATVAGADVGK FEQLTLDKTP VSTAVTDEPG SGTPGTGNQG
2701 DLVLVTITAD QTSVAENVKP TFTVHINTAL ANDLVVTLSN NAQVTIKAGQ TSAPYEHAAQ
2761 GDDVYNDAGE ISVGIKSAVD VDGRTFENLQ LGDAATVQVT DTTDEVVAKL TATPSVTEGG
2821 EITYTITLTN KDGLPINNHG ALTFTLSDGK TVITVPANGT SGSITVTAPD NVYVGTNPAV
2881 VNSIATVAGA DVGKFEQLTL DKTPVSTQVT DEPGTPGTPG GNNEGDLVKV TITADQTSVA
2941 ENVKPTFTVH INQPLDHDLV VTLSNNAQVT IKAGQTSAPY EHAAQGDDVY KDAGEISLGI
3001 KSAADIGGRT FENLQLGDAA KVNVTDTNDE VIAKLTATSS VTEGGVITYT VTLTNKDGLP
3061 IDKHGALTFT LDDGKTTITI PANGTTGTAT VTAPDNVYTG TNAPVVKAIQ SVTGADVGKF
3121 EQLTLDKTPV STAVTDEPGS GTPGTGNQGD LVLVTITADQ TSVAENVKPT FTVHINTALA
3181 NDLVVTLSNN AQVTIKAGQT SAPYEHAAQG DDVYKDAGEI SLGIKSAADI GGRTFENLQL
3241 GDAAKVNVTD TNDEVIAKLT ATSSVTEGGV ITYTVTLTNK DGLPIDKHGA LTFTLDDGKT
3301 TITIPANGTT GTATVTAPDN VYTGTNAPVV KAIQSVTGAD VGKFEQLTLD KTPVSTAVTD
3361 EPGSGTPGTG NQGDLVLVTI TADQTSVAEN VKPTFTVHIN TALANDLVVT LSNNAQVTIK
3421 AGQTSAPYEH AAQGDDVYKD AGEISLGIKS AADIGGRTFE NLQLGDAAKV NVTDTNDEVI
3481 AKLTATSSVT EGGVITYTVT LTNKDGLPID KHGALTFTLD DGKTTITIPA NGTTGTATVT
3541 APDNVYTGTN APVVKAIQSV TGADVGKFEQ LTLDKTPVST AVTDEPGSGT PGTGNQGDLV
3601 LVTITADQTS VAENVKPTFT VHINTALAND LVVTLSNNAQ VTIKAGQTSA PYEHAAQGDD
3661 VYKDAGEISL GIKSAADIGG RTFENLQLGD AAKVNVTDTN DEVIAKLTAT SSVTEGGVIT
3721 YTVTLTNKDG LPINNHSALT FTLNDGKTTI TVPANGTVGT ATVTAPDNVY VGANDPVIKS
3781 IASVSGTDVG KFEQLTLDKT SVSTTVTDEP GSGTPGTGNQ GDVTTVGITG TGSLTEGETG
3841 QYTLTLSNAS KAEVTITLSY SGTAKNGEDF TGVTTVKIPA NSTGTTFNIA TIDDKLVEGT
3901 ENFVVKIETA TGGNFENLQV DSSKSSVTTT ILDNDHLPVS PGGAVFGVED TDYVFAWSDF
3961 KVTDADGNTG LSVTITSIPG AGSLQFFNGT AWVNVTVGQV VSQADIIAKN LKFVPLLNQS
4021 GSDNYGGNGV GNQKADYAQF KYKPNDGTNL GTEVTMKVDI SPVADKPTLS FGSADIESKG
4081 LTKEVWTSLK GLGTGGNGIT GEDLKTVFAN SGNANSSSTT TNVQSDGSVT AGTGSKTSGL
4141 IYLEAGKTYT FSGTADDSFV VTIGGKTVVT ATWGAGGQVS GTFTPNTSGY YPIEVYHANQ
4201 SGPGSYDLNI QVGSGTPTDL SSSSIKMYQN VTEMANAGLG VSDLHTVNGQ SYYDGYKLNE
4261 GPEGGSVKLV GINTALTDTD GSETLNVSLS GIPKGTVLSD GAGHTVTVGS APVDVTGWKL
4321 SGLTLTPPAY YKGSFDITVT STATESLGGS AITTGNIPVT VYGATYKASV GTSGNDTMTG
4381 SEGNDIIVAD VSGLNVVQGK NYNIAFMVDS SGSMSDQSVA TAKAQLASVF QTLKASLGSD
4441 SSGTVNIFLV DFDTQVNKNV TVNLNDTDAL SKLQTVLDSM VGGSRYGGGT NYEDAFKTTS
4501 NFFKSTVALS NSGAENLTYF ITDGKPTYYQ NGESTNPRLW TNGKYLDDVV SVNNYKIGDT
4561 FSAWADSTHK VEISSNGLIT VSTYKSNGRL DSIKEIGTIH AQGDGTYETS DLAGTGYADY
4621 WNYYYSAAGS TASFAVLGGK DTGLSKVQAI GLNSDVSLSD LTAYDTAGKP QANIDPSDLA
4681 KAILGHSEAI LPGADTIDGG NGNDIIFGDL ITLNGVVSEG YQALQTYVAQ KSGVEASAVT
4741 TSNVHQYITE HYTEFDISGA NDGKDFLSGG NGNDILFGQG GNDTLDGGRG NDILLGGTGN
4801 DTLIGGHGDD ILIGGSGADT FVWKAGDYGN DVIKDFKVGE KDKIDLSDLL QGEKGSTIDN
4861 YLKLTTVEGT TTLQVSSEGK LNDAGGLANA DVTIKLEGVN WSNTTVNSLI SGADPTIIIH
4921 NKDS
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